Enterobacter hormaechei subsp. steigerwaltii: LI62_19290
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Entry
LI62_19290 CDS
T03708
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ecly
Enterobacter hormaechei subsp. steigerwaltii
Brite
KEGG Orthology (KO) [BR:
ecly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecly03016
]
LI62_19290 (truD)
Enzymes [BR:
ecly01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LI62_19290 (truD)
Transfer RNA biogenesis [BR:
ecly03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LI62_19290 (truD)
Prokaryotic type
LI62_19290 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AJB64087
UniProt:
A0AAE4E432
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All DBs
Position
complement(3709653..3710702)
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AA seq
349 aa
AA seq
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MTDFDNLTYLHGKPQGKGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLNIHAREVSFAGQKDKHAVTEQWLCARVPGNAMPDLSKFELEGCKVLEYARHKRK
LRPGALKGNDFTLVLREVTDRDDVEKRLKAITERGVPNYFGAQRFGIGGSNLLGALRWAQ
SSAPVRDRNKRSFWLSAARSALFNQIVSERLKKPDANQVVVGDALQLAGRGSWFVATADE
MADAQSRVDAKALMITAALPGSGDWGTQGEALAAEQSAVADAPELQSLLVREKVEAARRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTSGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacggatttcgacaacctgacgtatctgcacggtaaaccgcagggcaagggtctgctg
aaagccaaccctgaagatttcgtggtagtggaagatctgggttttgagccggatggcgaa
ggcgagcacatcctggtgcgcattctgaaaaacggctgcaacacccgcttcgtggcggac
gcgctggcaaaattcctcaacattcacgcccgcgaggtgagctttgccggtcaaaaggat
aagcatgccgtgaccgaacagtggctttgcgcccgcgtgcccggcaatgctatgcccgat
ttaagcaaatttgagcttgagggctgtaaggtactggagtatgcccgccacaaacgcaaa
ttgcgtccgggagcgttgaaaggcaacgatttcacgctggtgctgcgtgaagtgaccgac
cgcgatgacgttgaaaaacgcctgaaggccattaccgaacgcggcgtgccaaactatttt
ggcgcacagcgctttggcattggtggcagcaacctgctgggcgcgctgcgctgggcgcaa
agcagcgcgccggtgcgcgacaggaataaacgcagtttttggttgtcggcagcccgcagt
gcgttgtttaatcagattgtgagcgaacggctgaaaaaaccggacgcgaatcaagttgtt
gtcggcgatgcgctacaattagcgggacgcggaagctggtttgtggcaacggccgatgag
atggccgatgcccagtcgcgcgtggacgctaaagcgttgatgattaccgccgccttgccg
ggctcaggcgactggggaacccagggcgaggcgctggccgctgagcagtcagcggtggcg
gatgcgccagaattacaatcattgctggtgcgggaaaaagtcgaggcggcgcgccgtgcg
atgctcctctacccgcaacagctgagctggaactggtgggatgacgtaaccgtcgagtta
cgcttctggctgccggcaggtagctttgccaccagtgttgtcagggaacttatcaacacg
tcgggtgattatgcgaatattgctgagtaa
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