Enterobacter hormaechei subsp. steigerwaltii: LI62_19910
Help
Entry
LI62_19910 CDS
T03708
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ecly
Enterobacter hormaechei subsp. steigerwaltii
Pathway
ecly03410
Base excision repair
ecly03430
Mismatch repair
ecly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LI62_19910
03430 Mismatch repair
LI62_19910
03440 Homologous recombination
LI62_19910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecly03400
]
LI62_19910
DNA repair and recombination proteins [BR:
ecly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LI62_19910
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LI62_19910
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LI62_19910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
RecJ_OB
DHH
Motif
Other DBs
NCBI-ProteinID:
AJB64205
LinkDB
All DBs
Position
complement(3843016..3844749)
Genome browser
AA seq
577 aa
AA seq
DB search
MKAPIKLRRRDAGETADLPDTLPLLLKRLYASRGVRTASDLERSVKGMLPWQALSGIEKA
TEMLYDAFREGTRIVVVGDFDADGATSTALSVLSLRALGCDNVTYLVPNRFEDGYGLSPE
VVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTDHHLPGETLPAAEAIINPNLR
DCDFPSKSLAGVGVAFYLMLALRTLLRDKGWFESRGIAVPNLAEYLDLVALGTVADVVPL
DTNNRILTWQGLSRIRAGKCRPGIKALLEIANRDPLKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLASELDALNQTRKEIEQGMQAEALTLCEKLERSGDTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLHP
NLMIKFGGHAMAAGLSLEEAKFDEFQRLFGELVTEWIDPALLQGEVVSDGELSPAEMTME
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRIVGERHLKVMVEPVGGGPLLDGIAFNVDTS
IWPDNGVREVELAYKLDINEFRGNRSLQIIIDNIWPI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagccccgataaaactgcgccgccgcgatgcgggtgaaaccgcggatttaccagac
acgcttccgctgctgttaaagcggctgtacgccagccgtggcgtgcgtacggcaagcgat
cttgagcgcagcgtcaaaggcatgctgccctggcaagcgctgagtggcatcgaaaaagcg
actgaaatgctctacgacgcgttccgggaaggcacgcggattgtcgtggtgggcgatttc
gatgccgacggcgcaaccagtaccgcgctgagcgtgctcagcctgcgtgcgctgggctgt
gataacgtgacttacctggtgccgaaccggtttgaagacggctacggcctcagcccggaa
gtggtcgatcaggcccacgcccgtggcgcacagatgatcatgaccgtggataacgggatc
tcttctcatgcgggggtcgatcatgcccatgcgctggggatcccggtactggtcaccgat
caccacctgccaggcgaaactctgcctgccgccgaagccatcattaacccgaacctgcgc
gactgcgatttcccgtcgaaatcgctggccggagtaggagtggcgttttatctgatgctg
gcgttacgcacgctgctgcgagataagggctggttcgaatcgcgcgggattgccgtgccg
aacctcgcggagtatctcgatctggtggcgctgggaaccgtggcggacgtggtgccgctc
gataccaataaccgtattctcacctggcagggcttaagccgcattcgggcaggtaaatgc
cgcccggggattaaggcgctgctggaaattgccaaccgcgatccgctgaagcttgcggca
agcgatttaggctttgccctcggcccgcgcctgaacgcggcgggacggctggatgatatg
tcggttggcgttgcgctgctgctgtgcgacaacatcggcgaagcgcgcgtgctggccagt
gagctggacgcactcaaccagacccgtaaagagattgagcagggcatgcaggccgaagcg
ctgaccctgtgcgaaaagctggagcgcagcggcgataccctgccgggcgggctggcgatg
tatcaccccgaatggcaccagggcgtggtgggcattctggcgtcgcgcattaaagagcgt
ttccaccgcccggtgatcgcgttcgcccccgccggggacggcacgctgaaaggctccggt
cgttccattcagggtctgcatatgcgcgatgcgctggagcgtctggatacgctgcatccg
aacctgatgattaagttcggcggtcacgcgatggcggcaggcctgtcgctggaagaggcg
aagttcgacgaattccagcgtctgtttggcgaactggtcaccgagtggatcgatccggct
ctgttgcagggtgaagtggtttctgacggtgagctttcaccggctgaaatgaccatggaa
gtggcgcagatgctgcgcgatgccggcccgtgggggcagatgttcccggagccgcttttc
gacggacgttttcgtttgctgcaacagcgcatcgtgggcgaacgccatctcaaagtgatg
gtggaaccggtcggcggcggaccgctgctcgatggcatcgcctttaacgttgatacctcc
atctggccggacaacggcgtgcgcgaggttgagctggcctataagctggatattaacgag
ttccgcggtaaccgctcccttcagatcatcatcgacaatatctggccaatttag
DBGET
integrated database retrieval system
