Enterobacter hormaechei subsp. steigerwaltii: LI62_22055
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Entry
LI62_22055 CDS
T03708
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
ecly
Enterobacter hormaechei subsp. steigerwaltii
Pathway
ecly02020
Two-component system
ecly02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ecly00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LI62_22055
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LI62_22055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecly03021
]
LI62_22055
Transcription machinery [BR:
ecly03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LI62_22055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AJB64596
LinkDB
All DBs
Position
4285001..4286434
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALDSNPLLEQTDLHDEVDAQQ
TQDTETLDSVDALEQKEMPDELPLDASWDEIYTAGTPSGTRADYQDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVTLDEILESIGNDEIELEEIEAVLK
RVQRFDPIGVAAKDLRDCLLIQLSQFAKETPWIDEARLIISDHLDLLANHDFRTLMRVTR
LKEEVLKEAVNLIQSLDPRPGQSIQTSEPEYVIPDVLVRKHNGRWVVELNADSIPRLQIN
QQYASMCTSARNDADNQYIRSNLQEARWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
FMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTTMLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaattacggctcagccagcaactggccatgacgccgcagctacag
caggcaatccgtctgttgcagctgtccacgttagaactccagcaggagctccagcaggcg
ctggacagcaatccgctgctggagcaaaccgatcttcatgacgaggtagacgcccagcag
acgcaggacacagaaacgctcgactccgtagatgcgctcgaacagaaagagatgccggac
gaactgccgctggatgccagctgggatgaaatctacaccgcgggtaccccttccgggacg
cgcgcagactaccaggacgatgaactcccggtctaccagggcgaaaccacccagtcgctt
caggactacctgatgtggcaggtagagctgacccctttctccgataccgatcgcgccatt
gccacctcgattgtcgatgccgttgacgacacgggctatttgaccgtgacgctggacgag
attctggaaagcatcggcaatgacgagattgaactggaagagattgaagccgtcctgaaa
cgcgttcagcgcttcgacccgattggcgtcgccgcgaaagatctgcgcgactgccttctg
atccagctttcgcagtttgccaaagagacaccgtggattgacgaagcccggctcatcatc
agcgatcatctggatctgctggcgaatcatgacttccgcaccctgatgcgcgtcacgcgc
ctgaaagaagaggtgctgaaggaagcggtgaatctgatccagtcgctcgatccgcgtccg
gggcagtcgatccagaccagcgaaccggaatatgtcattcctgatgtgctggtgagaaaa
cacaatggccgctgggtcgttgaactgaacgccgacagcattcctcgcctgcaaatcaac
cagcaatacgcctccatgtgcaccagcgcacgtaatgacgctgataatcaatacattcgc
agcaaccttcaggaagcacgctggttgatcaagagcctggagagccgtaatgacacgctg
ctgcgcgtcagccgctgtattgtcgaacagcagcaggcgttctttgagcagggcgaagag
tttatgaaaccgatggtgctggcagacatcgcccaggccgtcgagatgcatgaatcaacc
atttcccgcgtgaccacgcagaaatatctgcacagcccacgcggtatttttgagcttaag
tatttcttctccagccacgtgaacaccgaaggcggcggcgaggcctcgtcaacggctatt
cgcgcactggtgaagaagttgatcgccgcggagaaccccgcgaagccactcagtgacagt
aagttaaccaccatgctgtccgatcagggtattatggtggcacgtcgtactgtcgcgaag
tatcgagagtctttatccattccgccgtctaaccagcgtaaacaactggtttga
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