Enterobacter hormaechei subsp. steigerwaltii: LI62_22310
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Entry
LI62_22310 CDS
T03708
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
ecly
Enterobacter hormaechei subsp. steigerwaltii
Brite
KEGG Orthology (KO) [BR:
ecly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecly03019
]
LI62_22310
Messenger RNA biogenesis [BR:
ecly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LI62_22310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
Motif
Other DBs
NCBI-ProteinID:
AJB64643
LinkDB
All DBs
Position
complement(4346340..4348280)
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AA seq
646 aa
AA seq
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MRLTTKFSAFITLLTGLTIFVTLIGCSLSFYNAIQDKLVNRVESVASVIDTRLIATSFPA
LSRELDELMVPVDIVQIDIKQGKQTVFSHTRQGSYRPAGTVDQYRDVTVNSLKHPGMTIH
LMYQDPMSNYLRSLMTTAPLTIAVAFIVLLIFLAVRWQRRQLSGQELLETRSVRILNGER
GPQVRGSVYEWPSRTSSALDVLLSEIQFASDQRSRMDTLIRSYAAQDNKTGLNNRLFFDN
QLATLLDDPEKVGTHGVVMMIRLPDFDLLRDTWGQRVAEENLFTLINLLSTFIMRYPGAL
LARYHRSDFAVLLPHRTLKESESIASQLLKAVDALPQSKMLDRDDMVHMGICAWRGGQST
EQVMEHAEAATRNAVLQGANGWAVYDDTLPEKGRGNVRWRTLIEQMLSRGGPRIYQKPAV
MKNGHVHHRELMCRIFDGTEEVISAEYLPMVLQFGLSEEYDRQQITRLIPFLSYWPEENL
ALQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIFELAEADVGQHISRLRPVVRLINALG
ARVAVTQAGLTLVSTRWIKELDVELLKLHPGLVRNIEKRTENQLLVQSLVEACKGTQTQV
FAAGVRSRSEWQMLTERGVTGGQGDFFAASQPLDTNVKKYLQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaagttctcagcttttatcaccttgctgacggggctgaccatattt
gtcacgctaatcggctgctcgctgagcttttacaatgccatccaggataagctggttaac
cgggttgaatcggttgcatcggttatcgacactcgcctgattgcaacctccttcccggcg
ctttcgcgtgagctggatgagttaatggtgcctgtggatatcgtgcagatcgacattaaa
caggggaagcagaccgttttcagccatacccgccagggcagctatcgtcctgccggcacg
gtagatcagtatcgggacgtcacggttaattcacttaaacatccgggtatgacaattcat
ctaatgtaccaggatccgatgagcaactatttacgctcgcttatgaccaccgcgccctta
accatcgccgttgcctttatcgtactgctgattttcctcgccgttcgctggcagcgtcgt
caactttccggccaggagctgctggaaacacgctccgtgcggatactgaatggcgaacgg
ggtccacaggtgcggggatcggtttatgaatggccatcacgcaccagtagcgccctggac
gtgttgctctccgaaatccagtttgccagcgatcagcgtagccgtatggacacgttgatt
cgctcttacgccgcgcaggataacaaaacgggcctcaacaaccgtctcttctttgataat
cagctggctacgcttcttgatgaccccgaaaaggtgggtacgcatggcgtggtaatgatg
attcgcctgcccgacttcgatctgctccgtgatacctggggtcagcgcgtggcggaagag
aacctctttacgctgattaacctgctgtccacctttattatgcgctaccccggcgcgtta
ctggcacgctaccaccgcagcgattttgccgtcttgctgccgcatcgcaccttaaaagag
tccgagagtatcgccagccagctgctgaaagccgtcgatgcgctgccccagagcaaaatg
ctcgacagagacgatatggtgcatatgggcatctgtgcctggcgcggcggtcagtcgacg
gagcaggtgatggaacatgcggaagcggccacgcgtaacgccgtattgcagggggcgaac
ggctgggcagtctatgatgatacgctgccggagaaagggcgtggcaacgtgcgctggcga
accctgattgaacagatgctgagccggggcggaccgcgcatctatcaaaaaccggcggtc
atgaagaatggtcatgttcatcatcgtgagctgatgtgccgtatttttgatggcactgaa
gaggttatctccgcggaatatctgcccatggtgttgcaattcggattgtccgaagagtat
gaccgtcagcaaatcacccgtctcattccgtttttatcgtactggcctgaagaaaatctg
gctttacaggtgaccgtcgaatcgctgatccgtccgcgtttccagcgctggttacgtgac
acgttaatgcaatgcgaaaaatcgcaacgcaaacgcattatttttgaacttgcagaggca
gatgtaggtcaacacatcagccggttgcgcccggtggtgcgtttaatcaatgcgcttggg
gctcgcgtggcggtaacccaggcgggtctgacgctggtgagcacccgctggatcaaagag
ctggatgttgaattattgaagctgcatccgggtctggtaaggaatattgaaaaacgcacg
gaaaaccagctgctggtacaaagcctggtggaagcgtgcaaaggaacgcaaacgcaagta
tttgccgcaggcgtacgttcacgaagtgaatggcagatgttgacagagcgcggcgtgacg
ggcggtcagggggatttttttgccgcctctcagccgcttgacaccaatgtgaaaaaatat
ttgcaaagatactctgtttga
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