Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA gyrase subunit B
|
KO |
|
Organism |
eclz Enterobacter hormaechei subsp. hormaechei
|
Brite |
KEGG Orthology (KO) [BR:eclz00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:eclz03032]
LI64_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:eclz03400]
LI64_00020 (gyrB)
Enzymes [BR:eclz01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LI64_00020 (gyrB)
DNA replication proteins [BR:eclz03032]
Prokaryotic type
DNA Topoisomerases
LI64_00020 (gyrB)
DNA repair and recombination proteins [BR:eclz03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LI64_00020 (gyrB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3914..6325
|
AA seq |
803 aa
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIV
VTIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVIQREGKIHRQIYQHGVPDAPLAVTGDTDKTGTMVRFWPSLETFTNVT
EFEYDILAKRLRELSFLNSGVSIRLRDKRDNKEDHFHYEGGIKAFVEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSEY
LLENPSDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDDAMDQYQIAIALDGATLHANSSAPALAGEPLERLVSEFNATQKMIGRMERR
YPKALLKELIYQPTLTEADLSNEQTVTRWVNTLVSELNEKEQHGSQWKFDVQQNAEQQFE
PIVRVRTHGVDTDYPLEHEFVTGPEYRRICTLGEKLRGLIEDDAFIERGERRQPVASFEQ
ALEWLVKESRRGLSIQRYKGLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFTTLM
GDAVEPRRAFIEENALKAANIDI |
NT seq |
2412 nt +upstreamnt +downstreamnt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaagggctggatgcggtgcgt
aagcgcccgggtatgtatatcggcgacacggatgacggcaccggtctgcaccacatggta
ttcgaggtggtagataacgctatcgacgaagcgctcgcgggtcactgtaaagacatcgtg
gtcaccattcatgcggacaactccgtctccgttaccgatgatggccgtggcatcccaacc
ggtattcacccggaagagggcgtctctgctgcggaagtgatcatgaccgtcctgcacgca
ggcggtaagttcgatgataactcctataaagtttccggcggtctgcacggcgtaggcgta
tccgtagtaaacgccctgtcgcagaagctggagctggttatccagcgcgaaggcaaaatt
caccgtcagatctaccagcacggtgtgcctgacgccccgctggccgttacgggtgatacc
gacaaaaccggtaccatggtgcgtttctggccgagccttgaaaccttcaccaacgtcacc
gaattcgagtacgacattctggcgaaacgcctgcgtgaactgtcgttcctgaactccggc
gtgtcgattcgtctgcgcgacaaacgcgacaacaaagaagaccacttccactacgaaggc
ggtatcaaggcgttcgttgagtatctgaacaagaacaaaacgccaattcacccgaatatt
ttctacttctccaccgaaaaagacggtatcggcgtggaagtggccttgcagtggaacgac
ggtttccaggaaaacatctactgcttcaccaacaacattccgcagcgcgacggcggtact
caccttgcgggcttccgtgcggcgatgacccgtaccctgaacgcctacatggacaaagaa
ggctacagcaaaaaagcgaaagtcagcgccaccggtgacgatgcccgtgaaggcctgatt
gccgtggtctccgtgaaggtgccggatccgaagttctcctcacagaccaaagacaagctg
gtctcttctgaggtgaaatcggcggttgagcagcagatgaacgaactgctgagcgaatat
ctgctggaaaacccgtccgacgcgaaaatcgttgtcggtaaaattatcgatgcggcgcgt
gcccgtgaagcggcgcgtaaagcccgtgaaatgacccgtcgtaaaggcgcgctggacctt
gctggtctgccgggcaaactggctgactgtcaggaacgcgacccggcgctgtctgaactg
taccttgtggaaggggactccgcgggcggttctgcgaagcagggccgtaaccgcaagaac
caggcgattctgccgctgaagggtaaaatccttaacgttgagaaagcgcgcttcgacaag
atgctctcttctcaggaagtggcgacgctcatcaccgcgctcggctgcggcattggtcgc
gacgagtacaacccggacaaactgcgctatcacagcatcatcatcatgaccgatgcggac
gtcgacggctcgcacattcgtacgctgctgttgaccttcttctatcgtcagatgccggaa
atcgttgagcgcggccacgtctacattgcccagccgccgctgtataaagtgaagaaaggc
aagcaggaacagtacattaaagatgacgacgcgatggatcagtaccaaatcgcgatcgcc
cttgacggtgcgaccctgcacgcaaactccagcgcaccagcgctggccggtgagccgctg
gagcgtctggtctccgagttcaacgccacgcagaaaatgattggccgtatggagcgtcgc
tatccgaaagcgctgctgaaagagctgatttaccagccgaccctgaccgaagccgatctg
agcaacgagcagaccgtcacccgctgggtgaacaccctggtgagcgagctgaacgagaaa
gagcagcatggcagccagtggaaattcgacgtccagcagaacgctgagcagcagttcgaa
ccgatcgtccgcgtgcgtacccacggcgtcgataccgactacccgctggagcacgaattt
gtgaccggtccggaataccgccgtatctgcaccctcggcgagaagctgcgcggtctgatc
gaagacgatgcgtttatcgaacgtggcgaacgtcgtcagccggtagccagcttcgaacag
gcgctggagtggctggtgaaagagtcccgtcgtggtctctctattcagcgttataaaggt
ctgggcgaaatgaacccggatcagctgtgggaaaccaccatggatccggaaagccgtcgc
atgctgcgcgtcaccgtgaaagacgcaatcgcagcggatcagctgttcacgaccctgatg
ggtgatgcggttgaaccacgtcgcgccttcatcgaagagaacgccctgaaagcggcgaat
atcgatatttaa |