Enterobacter hormaechei subsp. hormaechei: LI64_04125
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Entry
LI64_04125 CDS
T03709
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
eclz
Enterobacter hormaechei subsp. hormaechei
Pathway
eclz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eclz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LI64_04125 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclz03019
]
LI64_04125 (pcnB)
Enzymes [BR:
eclz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LI64_04125 (pcnB)
Messenger RNA biogenesis [BR:
eclz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LI64_04125 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AJB69792
LinkDB
All DBs
Position
complement(862466..863809)
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AA seq
447 aa
AA seq
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MANDAIAQPHMSVIPREQHNISRKDISENALKVLYRLNKAGYEAYLVGGGVRDLLLGKKP
KDFDVTTSATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEAGVNDRTTSQ
RGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMQDLKDGLIRLIGTP
ETRYREDPVRMLRAVRFAAKLNMRISPETAEPIPRLATLINDVPPARLFEESLKLLQAGY
GFETYNLLREYNLFQPLFPTITRYFTENGDSAMERIIAQVLKNTDTRIHNDMRVNPAFLF
AAMFWYPLLETAQRITQESGLAYYDAFALAANDVLDEGCRTLAIPKRITTLVRDIWQLQL
RMSRRQGKRAWKLMEHPKFRAAFDLLSLRAEVERNQELQRLAQWWGEFQVSAPPEQKDML
TDLDDEPAPRRRHRRPRKRAPRREGTA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgacgctattgcacagccacacatgtcggtcattccgcgtgagcagcacaat
atttcccgcaaagatatcagtgaaaatgccctcaaggtgctctatcgtctgaataaagca
ggctacgaggcctatctcgtcggcggcggggttcgcgatttactgctgggcaaaaaacca
aaagatttcgacgtgacgaccagcgccacgcctgaacaggtgcgtaaattattccgcaac
tgccgtctggttggccgccgtttccgtctggcgcacgtgatgtttgggccggaaattatt
gaagtggcgaccttccgcggtcatcacgaagcgggcgtcaacgatcgcacgacttcccag
cgcggccaaaacggcatgctgctgcgcgacaacatcttcggctctattgaagaagatgcc
cagcgtcgcgatttcaccatcaacagcctttactacagcgtggcggactttaccgtacgc
gattacgttggcggcatgcaggatctgaaagatggcctgattcgcctgatcggcacgccg
gaaacgcgctatcgcgaagatccggtccggatgctgcgcgccgtgcgtttcgccgccaag
ctgaatatgcgcatcagcccggaaaccgcagagccgatcccgcgcctggcgacgctgatt
aacgacgtgccccctgcccgtctgtttgaggagtcgttaaagctgctccaggcaggctac
gggtttgaaacctacaatctgctgcgtgaatacaacctgttccagccgctgttcccgacc
attacccgctacttcaccgaaaacggtgacagcgcaatggagcggataattgcgcaggta
ctgaagaacacggatacccgtattcataacgatatgcgtgtgaatccggcgttcctgttc
gcggccatgttctggtatccgctgctggaaacggcgcagcgcatcacccaggagagcggt
ctcgcctattatgatgcgttcgcgctggcggcaaacgacgtgctggacgaaggctgtcgc
acgctggcgatcccgaaacggatcaccacgctggtgcgtgatatctggcagcttcagctg
cgtatgtcccgccgtcagggtaaacgcgcctggaagctgatggagcatccgaagttccgc
gccgcgttcgatctcctctctctgcgtgctgaagttgaaaggaatcaggagctacagcgt
ctggcgcagtggtggggcgagtttcaggtttctgcgccaccggagcagaaagatatgctt
acggatctggatgatgagccggcaccgcgccgtcgtcaccgtcgcccgcgtaagcgcgca
ccgcgtcgtgaaggcacggcatga
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