Enterobacter hormaechei subsp. hormaechei: LI64_04320
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Entry
LI64_04320 CDS
T03709
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
eclz
Enterobacter hormaechei subsp. hormaechei
Pathway
eclz03030
DNA replication
eclz03430
Mismatch repair
eclz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eclz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LI64_04320 (dnaE)
03430 Mismatch repair
LI64_04320 (dnaE)
03440 Homologous recombination
LI64_04320 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eclz03032
]
LI64_04320 (dnaE)
03400 DNA repair and recombination proteins [BR:
eclz03400
]
LI64_04320 (dnaE)
Enzymes [BR:
eclz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LI64_04320 (dnaE)
DNA replication proteins [BR:
eclz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LI64_04320 (dnaE)
DNA repair and recombination proteins [BR:
eclz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LI64_04320 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AJB69830
LinkDB
All DBs
Position
908390..911872
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTAHGA
GLKPIVGADFHVQSDLIGDELTQISVLAMNNTGYQNLTLLISKAYQRGYGALGPWIDRDW
LAELNEGLLLISGGRMGDVGKCLLRGNNALVDQCVSFYEEYFPDRYYLELIRTGRADEES
YLHAAVALAEERGLPVVATNDVRFLEPGDFDAHEIRVAIHDGFTLDDPKRPRNYSSQQYM
RNEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVMKSKEGL
EERLEFLFPDEAVRKEKRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFEDGAKKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYSNCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGHRLKDMHPTERGKITTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcatagcgactactccatgatcgatggg
ctggctaagaccgggccgctggtaaaaaaggcggcctcgcttggcatgcctgcgctggcg
atcaccgattttaccaacctgtgtggcctggtgaagttctacggaacggcgcatggcgca
ggattaaagcctatcgtcggcgcggattttcacgtgcagagcgatctcatcggcgatgaa
ctgacgcaaatctccgtgttagccatgaataacacgggttatcagaacctcactctgctg
atctcaaaggcctaccagcgtggctacggcgcactgggtccatggattgaccgcgactgg
ctggcggagctgaacgaaggtttgctgctgatctccggtggccgtatgggagatgtcggc
aaatgtctgctgcgcggtaacaacgcgctggtggatcagtgcgtctcgttctacgaagag
tatttcccggatcgctattacctggagctgatccgtaccggacgtgcggacgaagagagc
tatttgcatgcggcagtcgccctcgcggaagagcgtggtctgcctgtggtggccaccaac
gatgtgcgcttccttgagccgggcgattttgacgcgcacgaaattcgcgtcgctattcac
gacggtttcaccctcgacgatccaaaacgcccgcgcaactactcctcgcagcagtacatg
cgcaatgaagaggagatgtgcgagctattctccgacatcccggaagcgctggaaaacagc
gtagagattgccaagcgctgtaacgttaccgtgcgtctcggcgaatacttcctgccgcag
ttcccgacgggcgacatgaccacggaagatttcctggtcatgaaatcgaaagaaggtctg
gaagagcgtctggaattcctcttcccggatgaagcggttcgtaaagagaagcgccctgaa
tacgacgagcgcctggatattgaactccaggtgatcaaccagatggggttcccgggctac
ttcctgatcgtaatggagtttatccagtggtcgaaggataacggcgtaccggttggtccg
ggccgtggttccggcgctggctcgctggtggcgtacgcgctgaaaatcaccgacctcgat
ccgctggaattcgacctgctgttcgaacgtttccttaacccggaacgtgtctccatgccc
gacttcgacgtcgacttctgcatggaaaaacgcgaccaggtgattgagcacgtggctgat
atgtacggtcgtgatgcggtttcgcagatcattacctttggtacgatggcggcgaaagcg
gttatccgcgacgtgggccgcgtcctgggccacccgtacggttttgtcgatcgtatctct
aagctggtgccgcccgatccgggcatgaccctggcgaaagcctttgaagccgaacctcag
ctgccggaaatctacgaagccgacgaagaggtgaaagcgctgatcgacatggcgcgcaag
ctggaaggcgtcacgcgaaatgccggtaagcatgcggggggcgtggttatcgccccgacc
aaaattaccgacttcgcgccgctgtactgcgacgaagcgggccagcacccggtcacccag
tttgataagaacgacgtagaatacgccgggctggtgaagtttgacttcctcggcctgcgt
acgctaaccatcatcaactgggcgctggagatgatcaacgcccgtcgcgagaagaacggc
gaaccgccgctggatatcgcggccatcccgcttgatgacaagaaaagtttcgacatgctg
caacgctcggagacgacagccgtcttccagcttgaatcccgtggcatgaaagatttgatt
aagcgtctgcaacctgactgcttcgaagatatgatcgcgctggtggccctgttccgtccg
ggcccgttgcagtcggggatggtggataactttatcgaccgtaaacacgggcgcgaagag
atttcctacccggacgtgcagtggcagcatgaaagcctgaaaccggtactggagccgacc
tacggcatcatcctgtatcaggaacaggtcatgcagatcgcccaggtgctttctggttat
acccttggcggcgcagacatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgttccatctttgaggatggggcgaagaaaaacggcgtcgatggcgaactg
gcgatgaaaatcttcgacctggtggagaaattcgccgggtacggatttaacaaatctcac
tccgccgcctatgctttggtgtcgtatcagacgctgtggctgaaggctcactatcccgct
gagtttatggcggcggtaatgaccgccgatatggacaacaccgagaaggtggttggcctg
gtggacgagtgctggcgcatgggcctgaagatcctgccgccggatattaactcgggcctg
tatcatttccacgttaacgatgacggggaaatcgtctatgggatcggcgcgatcaagggc
gtgggtgaggggccgatcgaggcgatcatcgaagcgcgtaacaacggcggctatttccgc
gagttatttgatctgtgcgcccgcaccgataccaaaaaactgaaccgccgcgtgctggaa
aaattgattatgtccggcgcgtttgacaggctggggccacaccgcgccgcgctgatgaac
tcgcttggcgatgcgctgaaagcggcggatcagcacgcgaaagcggaagccattggccag
gcggatatgttcggcgtgctggcggaagagccagagcagattgagcagtcttattccaac
tgccagccctggccagaacaggtggtgctggatggggagcgtgagacgttaggcctgtac
ctgacggggcacccgatcaaccagtacctcaaagaaattgagcgctatgtcggcggccac
aggcttaaagacatgcatccgacagaacgtggtaaaatcaccacggctgcggggctcgtg
attgctgcaagggtaatggtcaccaagcgcggcaatcgtatcggcatctgtaccctggat
gaccgttccgggcgtctggaggtgatgttgttcaccgacgcgctggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggggggcttaaaatgaccgcccgcgaagtgatggacattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggaccattccagtacatctctactatcag
agggcggatgcacgtgcgcggttgcgctttggtgcaacgtggcgtgtctctccgagcgat
cgtttactgaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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