Enterobacter hormaechei subsp. hormaechei: LI64_11960
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Entry
LI64_11960 CDS
T03709
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
eclz
Enterobacter hormaechei subsp. hormaechei
Brite
KEGG Orthology (KO) [BR:
eclz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eclz03016
]
LI64_11960
Enzymes [BR:
eclz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LI64_11960
Transfer RNA biogenesis [BR:
eclz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LI64_11960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Rho_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
AJB71222
LinkDB
All DBs
Position
2495093..2497027
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
SAVIHTEKERESAEPEALIEPFLTRFVGKVHKKDDRLSVVPDHPLLKDAIPCRAARGVEH
DFVEGDWAVAEMRRHPLKGDRGFYAELTQYITFGDDHFVPWWVTLARHNLEKEAPDGVAT
EMQDEGLERRDLTALDFVTIDSASTEDMDDALYAEETADGKLHLTVAIADPTAWIVEGSK
LDEMAKVRSFTNYLPGFNIPMLPRELSDDLCSLRAHEVRPVLACRMTIAADGTIEEDIEF
FAATIESKAKLAYDNVSDWLENTGSWKPESDTIAAQIRLLHRVCLSRSEWRQTHALVFKD
RPDYRFVLGEKGEVLNIVAEPRRIANRIVEEAMISANICAARVLRDKLGFGIYNVHTGFD
PANTEALAALLKTHDVHVDPEEVLTLQGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGESVARPQDDTTLQMAERRRLNRM
AERDVGDWLYARFLNDKAGTDTRFPAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgtgcagaaggggtcgtaaaagccacggaaaagggctttggctttcttgaagttgacggt
cagaagagctacttcattccgcctcctcagatgaagaaagtgatgcatggcgaccgcatt
tcggccgttattcataccgaaaaggaacgagaatctgccgagccggaagcactgatcgaa
cctttcctgacccgctttgtcgggaaagtgcataaaaaagacgatcgtctttctgtcgtg
ccggatcatcctctcctgaaagatgctattccgtgccgcgccgcgcgtggcgttgagcat
gattttgttgagggggactgggcggtggctgagatgcgccgtcatccgttaaaaggcgat
cgcggtttctacgcagagctaacccagtacatcaccttcggcgacgaccatttcgtcccc
tggtgggtgacgctggcgcgccacaacctcgaaaaagaagcccctgatggcgtggcaact
gaaatgcaggacgaaggtctggaacgtcgcgatctgacggcgctggactttgttaccatc
gacagcgccagcaccgaggatatggacgatgcgctgtatgccgaagagacagccgatggc
aagctgcatctgaccgtcgccatcgccgatcctaccgcatggattgttgaaggcagcaag
ctggacgagatggccaaagtgcgttcgttcaccaactacctgccgggctttaacattccg
atgctgccgcgtgaactctccgacgacctttgctcgttgcgtgcgcatgaagtgcgtccg
gtgctcgcctgtcgcatgaccatcgcggctgacggtaccattgaagaggacatcgagttc
ttcgccgccaccatcgaatccaaagccaagctggcctatgacaacgtatccgactggctg
gagaatacgggcagctggaaacccgagtccgacactattgctgcacaaattcgtctgctg
caccgcgtctgtctgagccgcagcgaatggcgtcaaacccacgcgctggtcttcaaagat
cgtccggactaccgttttgtgctgggtgaaaaaggtgaagtgctgaatatcgtcgctgag
ccgcgccgtattgccaaccgcatcgttgaagaagcgatgatttccgccaacatttgtgcc
gcacgcgtgctgcgcgacaaattaggctttggcatttacaacgtgcacaccgggtttgat
ccggcgaacaccgaagcgctggctgccctgctgaaaactcatgacgtacacgttgatcct
gaggaagtgcttacccttcagggtttctgcaaactgcgccgcgagctggacgcacagccg
tcagggttccttgacagccgtattcgccgcttccagtcctttgcggaaatcagcaccgag
ccaggcccgcactttggtctcggtcttgaggcgtacgcgacctggacctctccgatccgt
aagtacggcgacatggtgaaccatcgtctgctgaaagcgatcattaaaggtgaatctgtt
gcgcgccctcaggatgatacgacgttgcagatggcagagcgtcgccgtctcaaccgtatg
gcggagcgtgatgtcggtgactggttgtacgcgcgcttcctgaatgataaggcggggact
gacacccgcttcccggctgaaatcatcgatatcagccgcggcggtatgcgcgttcgtctg
gtagataatggcgccgttgcctttatccctgccccgttcctgcacgccgttcgcgatgaa
ctggtttgtagccaggaaaacgggaccgtgcaaattaaaggcgaaacggtatacaaggtc
acagacgtgattgatgtcaccatcgctgaagtccgtatggaaacccgcagcattatcgcg
cgccctgtcgcctga
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