Enterobacter hormaechei subsp. hormaechei: LI64_12760
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Entry
LI64_12760 CDS
T03709
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
eclz
Enterobacter hormaechei subsp. hormaechei
Brite
KEGG Orthology (KO) [BR:
eclz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eclz03016
]
LI64_12760
Enzymes [BR:
eclz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LI64_12760
Transfer RNA biogenesis [BR:
eclz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LI64_12760
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Sfi1
Motif
Other DBs
NCBI-ProteinID:
AJB71365
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All DBs
Position
complement(2671393..2672547)
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AA seq
384 aa
AA seq
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MGANKRESDLNYQMITTNDELASLCEVTRDFPAIALDTEFVRTRTYYPQLGLIQMYDGKH
VSLIDPLDITDWAPMRELLLDTAVTKYLHAGSEDLEVFLNTFGIMPQPLIDTQILAAFSG
RPLSWGFAAMVEEYTGLTLDKSESRTDWLARPLTARQLDYAAADVFYLLPIAGQLMKEAE
ASGWLSAALDECRMTQQRRQEVVDPKEAWRDITNAWQLRTRQLACLQLLADWRLRKARER
DLAVNFVVREEHLWAVARYMPGSLGELDSIGLSGSEIRFHGKTLLALVEKAQQLPEEALP
EPLLNLMDMPGYRKAFKDIKALVQTVAGESKLSAELLASRRQINQLLNWHWKLKPQNGLP
ELVAGWRGELMAERLNTLLEGYPR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcaaacaaaagagagtccgatttgaattaccagatgatcactaccaacgacgag
ctggcttcgctgtgcgaggtgacgcgtgattttcccgctatcgccctggatacggaattt
gtccgcacccgaacgtactatccgcagctgggtctgattcagatgtatgacggcaaacac
gtgtcgttgattgacccactcgacattaccgactgggcaccaatgcgcgaactgttgctt
gataccgccgtgaccaaatatctgcacgcgggcagtgaagatctggaagtattcctcaac
acctttggcatcatgccgcaaccgctgattgatacccagatcctcgcggcgttcagcggt
cgtccgctctcctggggctttgcggcgatggtggaagagtacaccggtctgacgctggat
aagagcgaatcgcgcaccgactggcttgcgcgaccgctcacggcgcgtcagcttgactat
gccgcggcagacgtcttctacctgctgccgatcgcaggccagctgatgaaagaggcggag
gcttccggctggctgtctgctgccctggacgagtgccgcatgacgcagcagcgtcgtcag
gaagtggttgacccgaaagaagcctggcgtgacatcaccaacgcctggcagctgcgcacc
cgtcaactggcctgtctgcaattgctggctgactggcgtctgcgtaaagcgcgcgagcgc
gatcttgcggtcaacttcgtggtgcgtgaagaacacctgtgggcggtggcgcgctatatg
ccgggtagccttggtgaactggacagcattggcctttccggaagtgaaatccgcttccac
ggcaaaacgctgctcgcgctggtggagaaagcccaacagctgccggaagaggcactgcca
gagccgctgcttaacctgatggacatgccgggctaccgcaaagcgtttaaagatatcaaa
gcgctggtgcagacggtggcgggtgaaagcaaactgagtgccgaactgctggcttcacgt
cgtcagattaaccagctgctgaactggcactggaagttgaaaccgcaaaatggtttaccg
gaactggtcgccggatggcgaggggaactgatggccgaacgcctgaataccctgctggaa
ggctatccacgctaa
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