Enterobacter hormaechei subsp. hormaechei: LI64_13775
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Entry
LI64_13775 CDS
T03709
Symbol
sbcB
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
eclz
Enterobacter hormaechei subsp. hormaechei
Pathway
eclz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eclz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LI64_13775 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eclz03400
]
LI64_13775 (sbcB)
Enzymes [BR:
eclz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
LI64_13775 (sbcB)
DNA repair and recombination proteins [BR:
eclz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LI64_13775 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LI64_13775 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LI64_13775 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJB71553
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All DBs
Position
2882475..2883899
Genome browser
AA seq
474 aa
AA seq
DB search
MSDSAARPTFLFHDYETFGTHPALDRPAQFAAIRTDDEFNIIGEPEVFYCKPADDYLPQP
GAVMVTGITPQEARDKGVSEAEFARRIHDLFTVPNTCVVGYNNIRFDDEVTRNIFYRNFY
DPYAWSWQNRNSRWDLLDIMRACYALRPEGIHWPENEDGLPSFRLEHLTRANGIEHSNAH
DAMADVYATIAMAKLVKTAQPRLFEYLLSHRSKQKLMTLIDVPQMKPLVHISGMFGAWRG
NTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSDTLRERLYTPKEALGDLPAVPVKLV
HINKCPVLAQANTLRPEDADRLGINRQHCLDNLKVLRDNPQVREKVVAIFAEAEPFVPSE
NVDAQLYNGFFSDADRAAMNIVLQTDPRNLPALDITFADKRIEKLMFNYRARNYPGTLDE
AEQERWLQHRRNVFTPEFLSSYAQELEMLYGQYEGNAEKQALLKALYQYAQEIV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgactctgctgcgcgcccgacttttttgttccacgattacgaaacctttggcacc
catccggcgctggaccgaccggcgcagtttgcggctattcgtaccgatgacgaatttaac
atcatcggggaacccgaagtgttttactgcaagcccgccgatgattacctgccgcagcca
ggcgcggtgatggtgacgggcatcacacctcaggaggcgcgggataaaggcgttagcgaa
gcagaatttgcccgtcgcatccacgatctgtttacggtgcccaatacctgcgtggtgggt
tacaacaacatccgttttgacgatgaagtgacgcgcaatatcttttaccgcaacttctac
gacccgtatgcctggagctggcagaaccgtaattcacgctgggatttgctggatatcatg
cgcgcctgctatgcgctgcgcccggaggggatccactggccagagaatgaagacggcttg
ccgagcttcaggctcgagcacctgacgcgggccaacggcatcgagcacagcaacgcccac
gacgcgatggcagacgtctacgcgaccatcgctatggcgaaactcgtcaaaaccgcgcag
ccgcgcctgtttgagtatctgttgagccatcgtagcaagcagaagctgatgacgctgatt
gatgtcccgcagatgaaaccgctggtgcatatttcaggaatgttcggtgcgtggcgcggg
aacacgagctgggtggcgccgcttgcctggcatccggacaaccgtaacgccgtcatcatg
gtcgatcttgccggggatatttcgccgctgcttgagctcgacagcgacaccttacgtgaa
cggctctatacgccgaaagaggcgctgggtgacctgcccgctgtaccggtgaaactggtg
catatcaacaaatgcccggtactggcgcaggccaatacgctgcgcccggaagacgccgac
cggctggggattaaccgtcagcactgcctcgacaacctgaaagtgctgcgcgacaacccg
caggtgcgggagaaagtcgtcgccatttttgccgaagcagagccgttcgtgccgtctgag
aatgtggatgcgcagctttataacggtttcttcagcgatgccgatcgtgcggcgatgaac
atcgtactgcaaaccgacccgcgtaacctgcccgcgctggatatcaccttcgcagataag
cgtatcgagaagctgatgtttaattatcgcgcgcgtaactatcccggcacgctggatgaa
gcagagcaggagcgctggttacagcatcggcgcaacgtgtttacgccggagtttctcagc
agctacgcacaagagctggagatgctttacggtcagtatgaagggaatgccgagaaacag
gcgctgctgaaagcgttgtaccagtacgcgcaagagattgtctga
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