Enterobacter hormaechei subsp. hormaechei: LI64_15945
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Entry
LI64_15945 CDS
T03709
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
eclz
Enterobacter hormaechei subsp. hormaechei
Brite
KEGG Orthology (KO) [BR:
eclz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eclz03009
]
LI64_15945
Enzymes [BR:
eclz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LI64_15945
Ribosome biogenesis [BR:
eclz03009
]
Prokaryotic type
rRNA helicases
LI64_15945
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Gene cluster
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Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF561
AAA_11
AAA_22
Shikimate_DH
CMS1
Motif
Other DBs
NCBI-ProteinID:
AJB71961
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All DBs
Position
3370048..3371376
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLNALESKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVAEHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RNQTMLFSATLEGDAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADNLEHKVELLK
HLLKQEEATRTIVFVRKRERVHELAEMLRNAGINNCYLEGEMAQVKRTEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGIAISLVEAHDHLLL
QKIGRYVDEPLKARVIDGLRPTTRAPSEKMTGKPSKKALAKRAERKEKEKEKPRVKQRHR
DTKNIGKRRKPSSAAPETKTEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctcaatgcccttgag
agcaaaggctttacacgcccgaccgccattcaggccgcggccattccgcctgcgcttgag
ggccgcgatgtgctcggttctgcgccaaccggcacggggaagacagcagcctacttgctg
cctgtgttgcagcatttgctcgattttccgcgtaaaaaatcaggcccgccgcgcattttg
atcctgaccccgacccgtgaactggcgatgcaggttgccgaacacgcgcgtgagctggca
gcgaacacccatctggatatcgcgaccatcaccggcggcgtagcgtatatgaaccacgcc
gaagtgttcagcgaaaaccaggatatcgttgtcgcgacgacaggccgtctgctgcaatac
ataaaagaagagaatttcgactgccgcgcggtggaaacgctgattctcgatgaagctgac
cgcatgcttgacatgggctttgcccaggatatcgagcacatcgcgggcgaaacgcgctgg
cgtaaccagactatgctgttctcggcaacccttgaaggggatgccatcaaagatttcgcc
gaacgtctgctggaagatccggtggaagtgtccgctacgccatcgacgcgtgagcggaag
aagatccaccagtggtactaccgcgcagataaccttgagcataaggttgagttgctgaaa
catctgctgaagcaggaagaggcaacccgcaccatcgtcttcgttcgcaaacgtgagcgc
gtgcatgagctggcggaaatgctgcgcaacgctggcatcaacaactgctatctcgaaggt
gaaatggcgcaggttaagcgtaccgaagggattaagcgcctgaccgatggtcgcgtgaat
gtgctggttgccaccgacgttgccgcgcgcggaatcgatatcccggacgtgagccacgtg
atcaactttgatatgccgcgcagcggagatacttacctgcaccgtattggtcgtactggt
cgtgcgggccggaagggtattgctatctctctggtagaagcacacgatcatttgctgctt
cagaaaattggccgctacgttgatgagccgcttaaagctcgcgtgattgacgggcttcgt
ccgaccacacgtgcgccgagtgaaaaaatgacgggtaaaccgtccaagaaagcgctcgcg
aaacgtgctgagagaaaagagaaagaaaaagagaagccgcgcgttaagcagcgccaccgc
gataccaagaatattggtaagcgccgtaagccaagctctgctgcgccagagacgaaaacg
gaagagtaa
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