Enterobacter hormaechei subsp. hormaechei: LI64_17010
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Entry
LI64_17010 CDS
T03709
Symbol
recB
Name
(GenBank) exonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
eclz
Enterobacter hormaechei subsp. hormaechei
Pathway
eclz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eclz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LI64_17010 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eclz03400
]
LI64_17010 (recB)
Enzymes [BR:
eclz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LI64_17010 (recB)
DNA repair and recombination proteins [BR:
eclz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LI64_17010 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
bDLD3
AAA_11
AIM5
Motif
Other DBs
NCBI-ProteinID:
AJB72143
LinkDB
All DBs
Position
complement(3592348..3595890)
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AA seq
1180 aa
AA seq
DB search
MTHTAEPLDPLRLPLQGERLIEASAGTGKTYTIAALYLRLLLGLGGNAAFSRPLSVEELL
VVTFTEAATAELRGRIRSNIHELRIACLRQTTDNPLYASLLDEIADKQQAAQWLLLAERQ
MDEASVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESELRYQACADFWRRHCYPLQRDIA
EAVHALWKGPEELLRAIDRYLQGEAPVIKSPPPADETLASRHEKIVAKIAALKQKWNESV
GEIDAIIENSGIDRRKFNRGNQGKWIEKISAWAEEETRGYQLPDALEKFSQRFLAERTKA
DGIVPEHPLFVAIEALLAEPLSLNDLMITRAMTEIRQAVAREKRRRGELGFDDMLSRLDE
ALSSENGEALASAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRQQPDTALLLIGDPKQAIY
AFRGADIFTYMKARSEVVAHYTLDTNWRSAPGMVESVNALFSRMETAFMFNEIPFLPVKS
APKNATLRFEVSGKVQPAMTFWLLEGEGYGVADYQAAMAQHCAAQIRDWLSAGARGEALL
WKGEQANPVKASDITVLVRSRQEAALIRDALTLLDIPSVYLSNRDSVFDTLEAQEMLWLL
QAVLAPERENTLRSALASSMLGLNARDIDALNHDEEAWDAVVEEFVHYRERWQKRGVMAM
LRELMTRRQIAENMLASSGGERRLTDILHISELLQEAGTQLESEHALVRWLAQQIADPNS
NASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIANYRVQDQAFYHDRETFDAVLDL
SKAETSVELAEAERLAEDLRLLYVALTRSVWHCSLGVAPVFRRRGEKTGESDFHLSALGR
LIQRGEPKDAAGLRLCIESLCGDDIALHLPSLPDNSRWQMAEAPATDLNARQITRVLADD
WRVTSYSGLQQHGQSIAQDLMPKLDIDAAGVGDVLAEPTLTPHQFPRGASPGTFLHGLFE
ELDFTRPVSEEWVSKMLQSGGYDAHWQPVLTGWINAILQAPLSEQGFSLSQLTAKNKQVE
MEFYLPVAGPLKAEALDALIRQHDPLSAGCPPLNFRQVQGMLKGFIDLVFRHDGRYYLLD
YKSNWLGENSEAYTQQAMAAAMQMHRYDLQYQLYTLALHRYLRHRIADYRYDDHFGGVIY
LFLRGVDAADPRSGIFSTRPDAELIDKMDNLFAANTEEMA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgacccataccgctgagccgcttgatcccctcagattacctctacagggtgagcgactg
attgaagcctcagcgggaacgggaaaaacctataccatcgccgcgctctatctgcgcctg
ctgttagggctgggcggcaacgccgctttttcgcgcccgttaagcgtggaggagctgctg
gtggtaaccttcaccgaagcggccactgccgagctgcgtggccgtattcgcagcaacatt
catgaactgcgcatcgcctgtctgcgccagacgacggataaccccctctacgcgagcctg
ctggacgagattgcggataagcaacaggctgcgcaatggctgctgctggccgaacggcaa
atggacgaggcatccgttttcaccattcacggtttttgtcagcgcatgctgagcctgaat
gcgtttgaatccggcatgctctttgaacagcagcttattgaagatgaatccgagcttcgc
tatcaggcctgcgcggatttctggcgtcgtcactgttatcccttgcagcgcgacattgcc
gaagcggttcacgccctgtggaaaggaccggaagagctgcttcgcgccatcgaccgttac
ctgcaaggcgaagcgccggtcattaaatctccgccacctgccgatgaaacgctggcctcg
cgccatgaaaagatcgtcgccaaaattgccgcgctgaagcagaagtggaatgaatcggtt
ggagaaatcgatgcgatcatcgaaaactcaggcatcgacagacgcaagttcaaccgtggg
aaccaggggaaatggattgaaaagatcagcgcctgggccgaggaggagacgcggggctac
cagctcccggacgcgctggaaaaattttcgcagcgctttttggccgagcgaaccaaagcc
gacggcattgtgcctgagcatcccctgtttgtggcgattgaagcgctgcttgcggagcca
ttatcgctcaatgatctgatgatcacccgcgccatgaccgagatccgccaggccgtcgcg
cgcgaaaaacgtcgccggggtgagttggggtttgatgacatgttgagccgcctggacgag
gccctgtccagtgagaatggtgaagcgctcgccagcgcaatccgtacccgttttccggtg
gcgatgatagacgaatttcaggacaccgatccccagcagtaccgcatttttcgccgtatc
tggcgacagcagcccgatacagccctgctgttgataggcgacccaaaacaggcgatttac
gccttccgtggggcagatatcttcacctacatgaaagcccgtagtgaggttgtcgcgcat
tacacgttagacacgaactggcgctccgctccggggatggttgagagcgtcaatgcgctg
ttcagccgtatggagacggcattcatgttcaatgaaatccctttcctgccggtgaaatcc
gcgccaaaaaacgcgaccctgcgctttgaagtcagtggaaaggtgcaacccgccatgacc
ttctggctgcttgaaggggaaggctatggcgttgctgactatcaggcggcgatggcccag
cactgcgccgcgcaaatccgtgactggctgagcgcaggcgcgcgcggtgaggcgctgctg
tggaagggggagcaggcaaatcctgttaaggcctctgatattaccgtgctggtgcgcagt
cgtcaggaagcggcgttaatccgcgatgcgctaacgttgctggatattccgtcagtgtat
ctctctaaccgcgacagcgttttcgacacgctggaagcccaggaaatgctctggctgctt
caggcggtgctggcgccggagcgcgaaaatacgcttcgaagcgcactggccagctctatg
ctggggttgaacgcgcgggatattgacgcgctcaaccatgatgaagaggcctgggatgcg
gtggtggaagagtttgtccattaccgtgaacgctggcaaaaacggggcgttatggcgatg
cttcgcgaattgatgacgcggcgtcagattgctgaaaatatgctggcgtcatccggcggt
gaaaggcgtctgaccgatattttacacatcagcgaactgttgcaggaagccggtactcag
cttgaaagtgaacatgccctcgtgcgttggctggcgcagcaaatcgcagatccaaacagt
aacgcctcaagccagcagatgcgtctggagagcgataagcatctggtgcaaattgtcacc
attcataaatcgaaaggcctcgaatatccgctggtctggctgccctttatcgcgaactac
cgcgttcaggatcaggccttttaccatgaccgggaaactttcgatgcggtgctcgatctc
agcaaagcggaaaccagcgttgaactggcagaagcggagcgtctggcggaggatttgcgc
ctgctttacgtggcgctaacccgttctgtctggcattgcagcctgggggtcgcgccggta
ttccgccgtcgcggggagaaaacaggggagagcgatttccatttaagcgcgttagggcgg
cttatccagcgtggtgagccgaaagatgcggcggggttgcgcctctgtattgagtcgctt
tgcggtgatgatatcgccctgcatctcccctctctgccagataacagccgctggcaaatg
gcagaagcgcccgcgaccgatcttaatgcgcgccagatcacccgggtgcttgccgacgac
tggcgcgtcaccagctattctggtctgcaacagcacgggcaaagtattgcgcaggatctt
atgccaaagctggatattgatgccgcaggcgtgggcgatgttctggctgaaccgacgtta
accccccatcagtttccgcgcggcgcctcaccgggaacgtttttacatggcctgtttgaa
gaactggatttcacccggcccgtcagcgaggagtgggtgtcgaaaatgttgcagagcggg
ggctacgacgcgcactggcagcccgtgcttacaggctggatcaacgccattttgcaggcg
ccgctgtcggagcagggcttctcacttagccagttaacggccaaaaataagcaggttgag
atggagttttatcttcctgtcgctggccctcttaaggccgaggcgctcgatgcgttgatc
cgtcagcacgatccgctgtcagccggttgcccgccgctgaacttccgtcaggtgcagggc
atgctgaaaggatttatcgacctggttttccgccacgacgggcgttattacctgctggat
tacaaatcaaactggttaggcgagaacagcgaagcctatacccagcaggcgatggcggca
gccatgcagatgcatcgctacgatctccagtatcagctctataccctggcgctgcaccgc
tatctgcgccaccgtattgcggactaccgctacgacgaccattttggtggcgtcatctac
ctgttcctgcgcggggtcgacgctgccgatccgcgctctggtatcttcagcacccgtccg
gatgcggaattgattgataaaatggataacctgtttgcagcaaacacggaggagatggca
tga
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