Enterobacter hormaechei subsp. hormaechei: LI64_17990
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Entry
LI64_17990 CDS
T03709
Name
(GenBank) RNA polymerase sigma factor FecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
eclz
Enterobacter hormaechei subsp. hormaechei
Pathway
eclz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
eclz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LI64_17990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eclz03021
]
LI64_17990
Transcription machinery [BR:
eclz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LI64_17990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_24
HTH_36
HTH_28
HTH_23
HTH_11
HAC6_helical
PCI
HTH_3
HTH_Tnp_4
HTH_7
HTH_Mga
HTH_40
TnsD
PP1_inhibitor
DUF2774
GerE
HTH_10
HTH_IclR
Rv2175c_wHTH
HTH_VMAP-M9
Motif
Other DBs
NCBI-ProteinID:
AJB72322
LinkDB
All DBs
Position
3795268..3795789
Genome browser
AA seq
173 aa
AA seq
DB search
MSDRATSTASLTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQDTFLRVMSSETLSTIRD
PRSFLCTIAKRVMVDLFRRNALEKAYLEMLALMPEGVAPSPEERESQLETLQLVDSMLDG
LNGKTREAFLLSQLDGLTYSEIAHKLGVSVSSVKKYVAKAVEHCLLFRLEHGL
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccgtgccacttccacagcttccttaacgttcgagtcgctttatggcacccat
cacggctggttgaaaagttggctgacgcgcaaactccagtctgcctttgatgcagatgac
attgcccaggacacttttttgcgggtaatgagcagcgaaacgctctcgacgatccgcgat
cctcgctctttcctgtgcactatcgccaaacgcgtgatggtggacctgtttcgccgaaac
gcgctggaaaaagcgtatctggagatgctggcgcttatgccggagggggtagcgccttca
cctgaggaacgcgaaagccagctcgagaccctacaactcgtcgacagcatgctggacggg
ctaaacggaaaaacacgtgaagcgtttctgctttcgcaactggatggcctgacatacagc
gagattgcgcacaaactcggtgtttccgtcagctccgtgaaaaaatacgtggcgaaagcc
gtcgagcactgcctgctgtttcgtctggagcatgggttatga
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