Enterobacter hormaechei subsp. hormaechei: LI64_18980
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Entry
LI64_18980 CDS
T03709
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
eclz
Enterobacter hormaechei subsp. hormaechei
Pathway
eclz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eclz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LI64_18980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclz03019
]
LI64_18980
03016 Transfer RNA biogenesis [BR:
eclz03016
]
LI64_18980
Enzymes [BR:
eclz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LI64_18980
Messenger RNA biogenesis [BR:
eclz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LI64_18980
Transfer RNA biogenesis [BR:
eclz03016
]
Prokaryotic type
tRNA degradation factors
LI64_18980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
aRib
KH_2
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AJB72505
LinkDB
All DBs
Position
complement(4004425..4006563)
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AA seq
712 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHDQQQVVIQNINDLVKEAGKPRWDWQPEAAND
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSEVTATLVAEDETLDANEIGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQIIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPEADK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQQGE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaaattccagtatggtcagcataccgtcacgctggaaacc
ggcatgatggcgcgtcaggctactgctgccgtaatggtaagcatggatgacactgctgta
ttcgttaccgtagttggccagaaaaaagctaaaccaggtcaggacttcttcccgctgacc
gttaactaccaggagcgtacctacgctgccggtaaaatcccgggtggcttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggcttcgtcaatgaagtacaggttatcgcaaccgttgtttccgtt
aacccacaggttaacccggacatcgtcgcgatgatcggtgcgtctgctgccctgtcactg
tctggtattccattcaatggcccaatcggtgctgcgcgcgttggttacatcaacgatcag
tacgtgctgaacccaactcaggaagagctgaaagagagtaagctggacctggttgttgcc
ggtactgaagccgcggtgctgatggttgaatccgaagctgaactgctgagcgaagaccag
atgctgggcgctgtggtatttggccacgaccagcagcaggttgttatccagaacatcaac
gacctggtgaaagaagccggtaaaccacgttgggactggcagccagaagcggccaacgac
gcgctgaacgcacgtgttgctgccctggcagaatctcgtctgagcgacgcataccgcatc
accgacaaacaggagcgctatgctcaggttgatgtgatcaaatctgaagtgaccgcgacc
ctggttgccgaagacgaaacgctggacgctaacgaaattggcgaaatcctgcacgccatc
gagaaaaacgttgttcgtagccgcgtactggcaggcgagccgcgtatcgacggccgtgaa
aaagacatgatccgtggtctggacgtgcgtaccggcgtactgccacgtacacacggttct
gcgctgttcacccgtggtgaaacgcaggcgctggtaaccgcgaccctgggtactgcacgt
gacgcacagatcatcgacgaactgatgggcgagcgcactgacagcttcctgttccactac
aacttccctccgtactctgtgggcgaaaccggtatggttggctcaccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgtgctggcagtgatgccagaagcagacaaa
ttcccgtacaccgtacgtgttgtgtctgaaatcactgaatccaacggttcttcttccatg
gcttccgtgtgtggtgcctctctggcgctgatggatgcaggcgtgccaatcaaagccgcc
gttgcgggtatcgcaatgggtctggtgaaagaaggcgacaactacgttgttctgtctgac
attctgggtgacgaagaccacctgggcgatatggacttcaaagtggcgggttcccgcgac
ggtatctctgccttgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgctctgaaccaggctaaaggtgcgcgtctgcacatcctgggcgtgatggaacaggct
atcaacgcaccacgcggtgatatctctgaattcgctccgcgtattcacaccatcaagatc
aatccagacaagatcaaagatgtcatcggtaagggcggttctgttatccgtgcgctgacc
gaagaaacgggcaccaccatcgaaatcgaagatgacggtactgtgaaaatcgcagcaacc
gacggcgagaaagcgaaatacgctatccgtcgtatcgaagagatcacggcagaaatcgaa
gtgggccgtatctacaatggtaaagtgacccgtatcgttgactttggtgcgttcgttgcc
atcggtggcggtaaagaaggtctggtacacatctctcagatcgctgacaagcgtgttgag
aaagtgaccgattacctgcaaatgggtcaggaagtaccggtgaaagttctggaagttgac
cgccagggccgtatccgtctgagcattaaagaagcaaccgagcagtctcagcctgctgcg
gcgccggaagctccggctgctgaacagcagggcgagtaa
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