Enterobacter hormaechei subsp. hormaechei: LI64_19410
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Entry
LI64_19410 CDS
T03709
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
eclz
Enterobacter hormaechei subsp. hormaechei
Brite
KEGG Orthology (KO) [BR:
eclz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclz03019
]
LI64_19410
Messenger RNA biogenesis [BR:
eclz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LI64_19410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
Motif
Other DBs
NCBI-ProteinID:
AJB72585
LinkDB
All DBs
Position
complement(4097676..4099616)
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AA seq
646 aa
AA seq
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MRLTTKFSAFITLLTGLTIFVTLIGCSLSFYNAIQDKLVNRVESVASVIDTRLITTSFPA
LSRELDELMVPVDIVQIDIKQGKRTVFSHARQGSYRPAGTVDQYRDVTVHSLKHPGMTIH
LMYQDPMSNYLRSLMTTAPLTIAVAFIVLLIFLAVRWQRRQLSGQELLETRSVRILNGER
GPQVRGSVYEWPSRTSSALDVLLSEIQFASDQRSRMDTLIRSYAAQDNKTGLNNRLFFDN
QLATLLDDPEKVGTHGVVMMIRLPDFDLLRDTWGQRVAEENLFTLINLLSTFIMRYPGAL
LARYHRSDFAVLLPHRTLKESESIASQLLKAVDALPQNKMLDRDDMVHMGICAWRGGQST
EQVMEHAEAATRNAVLQGANGWAIYDDTLPEKGRGNVRWRTLIEQMLSRGGPRIYQKPAV
MKSGHVHHRELMCRIFDGTEEVISAEYLPMVLQFGLSEEYDRQQITRLIPFLSYWPEENL
ALQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIFELAEADVGQHISRLRPVVRLINALG
ARVAVTQAGLTLVSTSWIKELDVELLKLHPGLVRNIEKRTENQLLVQSLVEACKGTQTQV
FAAGVRSRSEWQMLTERGVTGGQGDFFAASQPLDTNVKKYLQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaagttctcagcttttatcaccttgctgacggggctgaccatattt
gtcacgctaatcggctgctcgctgagcttttataatgccatccaggataagctggttaac
cgtgttgaatcggttgcatcggttatcgacacccgcctgattacgacctccttcccggcg
ctttcgcgtgagctggatgagttaatggtgcctgtggatattgtgcagatcgacattaaa
caggggaagcggaccgttttcagccatgcccgccagggcagctatcgtcctgccggcacg
gtagatcagtatcgggacgtaacggtacactcacttaaacatccgggtatgacaatccat
ctgatgtaccaggatccgatgagcaactatttacgctcgctcatgaccaccgcgccctta
accatcgccgttgcctttatcgtactgctaatttttctcgccgttcgctggcagcgtcgt
caactttccggccaggaactgctggaaacccgctccgtgcggatactgaacggcgagcgg
ggtccgcaggtgcggggatcggtttatgaatggccatcacgcaccagtagcgctctggac
gtgttgctctccgaaattcagtttgccagcgatcagcgtagccgtatggacacgttgatt
cgctcttacgccgcgcaggataacaaaacgggcctcaataaccgtctcttctttgataat
caactggctacgcttcttgatgaccccgaaaaggtgggtacgcatggcgtggtaatgatg
attcgtctgcccgacttcgaccttctccgggatacctggggccagcgcgtggcggaagag
aacctcttcacgctgatcaacctgctgtccacctttattatgcgctaccccggagcgcta
ctggcgcgctaccaccgcagtgactttgccgtcttgctgccgcatcgcaccttaaaggag
tccgaaagtatcgccagccagttgctgaaagccgtcgacgcgctgccccagaacaaaatg
ctcgacagagacgacatggtgcacatgggcatctgtgcctggcgcggcggtcagtcgacg
gagcaggtgatggaacatgcggaagcggccacgcgcaacgccgtcttacagggggcgaac
ggctgggcgatctatgatgatacgctgccggagaaagggcgcggcaacgtgcgctggcga
accctgattgaacagatgctgagccgcggtggaccgcgcatctatcaaaaaccggcggtc
atgaagagtggtcatgtccatcatcgtgagctgatgtgccgtatctttgatgggaccgaa
gaggttatctccgcggagtatttaccgatggtgctgcaattcggattgtccgaagagtat
gaccgccagcaaattactcgtctcatcccgtttttatcgtactggcctgaagaaaatctg
gctttacaggtgaccgtcgaatcgctgatccgcccgcgcttccagcgctggttacgtgac
acgttaatgcaatgcgaaaaatcgcaacgcaaacgcattatttttgaacttgcagaggca
gatgtaggtcaacacatcagccggttgcgcccggtggtgcgtttaatcaatgcacttggg
gctcgcgtggcggtaacccaggcgggtctgaccctggtgagcaccagctggatcaaagag
ctggatgtcgaattattgaagctgcatccgggtctggtaaggaatattgaaaaacgcacg
gaaaaccagctgctggtacaaagcctggtggaagcgtgcaagggaacacaaacgcaagta
tttgccgcaggcgtacgttcacgaagtgaatggcagatgttgacagagcgcggcgtgacg
ggcggtcagggggatttttttgccgcctctcagccgcttgacaccaatgtgaaaaaatat
ttgcaaagatactctgtttga
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