Escherichia coli SMS-3-5 (environmental): EcSMS35_0074
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Entry
EcSMS35_0074 CDS
T00672
Symbol
sgrR
Name
(GenBank) sugar transport-related sRNA regulator SgrR
KO
K11925
SgrR family transcriptional regulator
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecm03000
]
EcSMS35_0074 (sgrR)
Transcription factors [BR:
ecm03000
]
Prokaryotic type
Helix-turn-helix
Other families
EcSMS35_0074 (sgrR)
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Gene cluster
GFIT
Motif
Pfam:
SgrR_N
SBP_bac_5
HTH_Crp_2
HTH_IclR
GpP-like_1st
Motif
Other DBs
NCBI-ProteinID:
ACB17484
UniProt:
B1LG06
LinkDB
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Position
complement(83496..85154)
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AA seq
552 aa
AA seq
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MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVG
RGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRH
ILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHW
RFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIAEIVSPTPWTLDIHLTQPDRWLP
LLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNSTNQLKIQAFDDFFGYRALIDEVN
VWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVL
SPTNLVYFAEEQYQQLWFPAYGLLPRWHHARPTHCEKPAGLESLTLTFYQDHIEHRVIAG
IMQQILASHQVTLEIKEISYDQWHEGEIESDIWLNSANFTLPLDFSLFAHLCEVPLLQHC
LPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFD
FKSAWFAPPDPE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgctcgtctgcaacaacagttcatccgcctgtggcaatgctgcgagggtaaa
tcgcaggacacaacgctcaacgaactggcagcgttattgagctgctcgcgtcgtcatatg
cgcaccctgctcaacaccatgcaggatcgcggctggctgacgtgggaagcggaagtcggg
cgcggtaaacgctcgcgtctgacattcctctataccgggctggcgcttcagcaacagcgg
gcggaagacctgctggagcaggatcgtatcgatcaactggtgcaactggttggcgacaaa
gcgactgtgcggcaaatgctggtttctcatctgggccgcagcttccgccaggggcgacac
atcctgcgtgtgctctactatcgtccgttgcgtaatctgctacctggcagcgcattacgc
cgttccgaaacccatatcgcccggcaaatcttcagttcgctaacgcgcataaatgaggaa
aatggggaactggaagcagacatcgcccaccactggcagcaaatatcaccgcttcactgg
cgtttctttttgcgtccaggagtccattttcatcatggtcgtgaactggaaatggacgat
gtgatcgcctctttaaaacggatcaatacgctgccgctctattcgcatattgctgaaatt
gtatcgccgacgccctggacgctggatatccacctcacgcagccggatcgctggttgccg
ttactgctggggcaagttccggcgatgatcctgccgcgcgaatgggaaaccctcagtaac
tttgccagccatcccatcggcaccggtccgtatgcggtgatccgcaacagcaccaatcaa
ctgaaaattcaggcattcgatgacttcttcggttaccgggcattaatcgacgaagttaac
gtctgggttctgccggaaattgccgacgagccagccggagggctgatgctaaaagggcca
cagggcgaggaaaaagagattgaaagccgcctggaggaaggttgctactatttactgttc
gacagccgcacccatcgcggggcgaatcagcaagtcagggactgggtaagctatgtgctt
tctccaactaatctggtctatttcgctgaggaacagtaccagcaactgtggttcccggct
tatggactgctcccccgttggcaccatgctcgtccgacacattgcgaaaaacccgccggg
ctggaaagcctcaccctgaccttttatcaggatcatattgagcatcgagtgattgccggg
atcatgcagcagattctggcaagtcaccaggtcacgctggaaatcaaagagatcagctac
gatcagtggcatgaaggagagatcgagagcgatatctggcttaacagcgccaactttacg
ctgccgctggatttttcgctgttcgcgcacttgtgcgaggtgccgctgctccaacactgt
cttccgatcgactggcaagccgacgccgcccgctggcgcaatggcgaaatgaacctggcg
aactggtgccagcaactggtcgccagcaaagcaatggtgccgcttatccaccactggctg
atcattcaggggcaacgcagtatgcgcggtctacgtatgaacaccctcggctggttcgat
tttaaatcagcgtggtttgcgccgccggatccagagtag
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