Escherichia coli SMS-3-5 (environmental): EcSMS35_0229
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Entry
EcSMS35_0229 CDS
T00672
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm03030
DNA replication
ecm03430
Mismatch repair
ecm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EcSMS35_0229 (dnaQ)
03430 Mismatch repair
EcSMS35_0229 (dnaQ)
03440 Homologous recombination
EcSMS35_0229 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecm03032
]
EcSMS35_0229 (dnaQ)
03400 DNA repair and recombination proteins [BR:
ecm03400
]
EcSMS35_0229 (dnaQ)
Enzymes [BR:
ecm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EcSMS35_0229 (dnaQ)
DNA replication proteins [BR:
ecm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EcSMS35_0229 (dnaQ)
DNA repair and recombination proteins [BR:
ecm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EcSMS35_0229 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
ACB19839
UniProt:
B1LHM4
LinkDB
All DBs
Position
245402..246142
Genome browser
AA seq
246 aa
AA seq
DB search
MTAMSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRL
VDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRD
IPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLA
MTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFATDEELAAHEARLDLVQKKGG
SCLWRA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctatgagcactgcaattacacgccagatcgttctcgataccgaaactaccggt
atgaatcagattggtgcgcactatgaaggccacaagatcattgagattggtgccgttgaa
gtggtgaaccgtcgcctgacgggcaataacttccatgtttatctcaaacccgatcggctg
gtggatccggaagcctttggcgtacatggtattgccgatgagtttttgctcgataagccc
acgtttgccgaggttgccgatgagttcatggactatatccgcggcgcggagctcgtgatc
cataacgcagcgttcgatatcggctttatggactacgagttttcgttgcttaagcgcgat
attccgaagaccaataccttctgtaaggtcaccgatagccttgcggtggcgaggaaaatg
tttcccggtaagcgcaacagcctcgatgcgttatgtgcccgctacgaaatagataacagt
aaacgaacgctgcacggggcattactcgatgcccagatccttgcggaagtttatctggcg
atgaccggtggtcaaacgtcgatggcttttgcgatggaaggagagacacaacagcaacaa
ggtgaagcaacaattcagcgcattgtgcgtcaggcaagtaagttacgcgttgtttttgcg
acagatgaagagcttgcggcacatgaagcccgtctcgatctggtgcagaagaaaggcgga
agctgcctctggcgggcataa
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