Escherichia coli SMS-3-5 (environmental): EcSMS35_0243
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Entry
EcSMS35_0243 CDS
T00672
Symbol
lfiR
Name
(GenBank) lateral flagellar export/assembly protein LfiR
KO
K02421
flagellar biosynthesis protein FliR
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EcSMS35_0243 (lfiR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ecm02044
]
EcSMS35_0243 (lfiR)
02035 Bacterial motility proteins [BR:
ecm02035
]
EcSMS35_0243 (lfiR)
Secretion system [BR:
ecm02044
]
Type III secretion system
Flagellar export apparatus
EcSMS35_0243 (lfiR)
Bacterial motility proteins [BR:
ecm02035
]
Flagellar system
Flagellar assembly proteins
Type-III secretion
EcSMS35_0243 (lfiR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_export_1
Usg
Motif
Other DBs
NCBI-ProteinID:
ACB19660
UniProt:
B1LHN6
LinkDB
All DBs
Position
complement(258392..259174)
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AA seq
260 aa
AA seq
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MRTSDVTQLTDLALGLWFPFVRIMAFLRYVPVLDNSALTVRVRIILSLALAIIITPLIPH
PIPHDLLSLNSLILTVEQILWGMLFGLMFQFLFLALQLAGQILSFNMGMSMAVMNDPSSG
ASTTVLAELINVYAILLFFAMDGHLLLVSVLYKGFTYWPIGNALHPQTLRTIALAFSWVL
ASASLLALPTTFIMLIVQGCFGLLNRIAPPLNLFSLGFPINMLAGLVCFATLLYNLPDHY
LHLANFVLQQLDALKGHYGG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacaagcgacgttacgcaactgacggatttggcgctggggctgtggtttcccttc
gtgcgcattatggcgtttctgcgctatgtgccggtgctggataacagcgccctgaccgtg
cgtgtgcggattattttgtcgctggcgctggcaatcatcatcacgccgttaattccgcat
cccattccccacgatctgctatcgctcaacagtctgatcctgacggtggagcaaatttta
tggggcatgttattcggattgatgtttcagtttctgtttctggcgctgcaactcgccggg
caaattctctcgttcaatatggggatgagcatggcggtgatgaacgacccaagcagcggc
gcatcgaccaccgtgctggcggagttaattaacgtctatgcgatcctgctgttttttgcc
atggacgggcatctgctgctggtaagcgtgctgtataagggtttcacctactggccgatt
ggcaacgcgctgcatccgcaaaccctgcgcaccatcgcgctggcctttagctgggtgctg
gcgtccgcatcactgctggcgctgccgaccacttttatcatgctgattgtgcagggctgc
tttggcctgcttaaccgcattgcgccgccgctgaaccttttttcgctcggctttcccatc
aacatgctggcggggctggtttgcttcgccaccctgctctacaacctgccggatcactat
ctgcatctggcgaattttgtgttgcagcaactcgacgcgctgaaaggtcactatggcgga
tag
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