Escherichia coli SMS-3-5 (environmental): EcSMS35_0427
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Entry
EcSMS35_0427 CDS
T00672
Symbol
sbcD
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecm03400
]
EcSMS35_0427 (sbcD)
DNA repair and recombination proteins [BR:
ecm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EcSMS35_0427 (sbcD)
Archaeal homologous recombinant proteins
EcSMS35_0427 (sbcD)
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GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
MIP-T3_C
Motif
Other DBs
NCBI-ProteinID:
ACB18902
UniProt:
B1LIT1
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All DBs
Position
complement(438025..439227)
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AA seq
400 aa
AA seq
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MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR
TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG
TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII
ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS
PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITEQLEQWRDVS
QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL
SVEEVFNRRLALEELDESQQQRLQHLFATTLHSLAGEHEA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatccttcacacctcagactggcatctcggccagaacttctacagtaaaagccgc
gaagctgaacatcaggcttttcttgactggctgctggagacagcacaaacccatcaggtg
gatgcgattattgttgctggtgatgttttcgataccggctcaccgcccagttacgcccgc
acgttatacaaccgttttgttgtcaatttacagcaaactggctgtcatctggtggtactg
gcaggaaaccatgactcggtcgccacgctgaatgaatcgcgcgatatcatggcgttcctc
aatactaccgtggtcgccagcgccggacatgcgccgcaaatcttgcctcgtcgcgacggg
acgccaggcgcagtgctgtgccccataccttttttacgcccgcgtgacattattaccagc
caggcggggcttaacggtattgaaaaacagcagcatttgctggcggctattactgattat
tatcaacaacattatgccgatgcctgcaaactgcgcggcgatcagcctctgcccatcatc
gccacgggacatttaacgaccgtgggtgccagtaaaagtgacgccgtgcgtgacatttat
attggcacgctggacgcgtttccggcacaaaactttccaccagccgactacatcgcgctc
gggcatattcaccgcgcgcagattattggcggcatggaacatgttcgctattgcggttcc
cccataccactgagttttgatgaatgcggtaagagtaaatatgtccatctggtgacattt
tcaaacggcaaattagagagcgtggaaaacctgaacgtaccggtaacgcaacccatggcg
gtgctgaaaggcgatctggcgtcgattaccgaacagctggaacagtggcgcgatgtatca
caggagccacctgtctggctggatatcgaaatcactactgatgagtatctgcatgatatt
cagcgcaaaatccaggcattaaccgaatcattgcccgttgaagtattgctggtacgccgg
agtcgtgaacagcgcgagcgtgtgttagccagccaacagcgtgaaaccctcagcgaactc
agcgtcgaagaggtgttcaatcgccgtctggcactggaagaactggatgaatcacagcag
caacgtctgcagcatcttttcgccacgacattgcatagcctcgccggagaacacgaagca
tga
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