Escherichia coli SMS-3-5 (environmental): EcSMS35_0458
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Entry
EcSMS35_0458 CDS
T00672
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EcSMS35_0458 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecm03400
]
EcSMS35_0458 (xseB)
Enzymes [BR:
ecm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
EcSMS35_0458 (xseB)
DNA repair and recombination proteins [BR:
ecm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EcSMS35_0458 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KxDL
DUF6687
Motif
Other DBs
NCBI-ProteinID:
ACB17809
UniProt:
B1LJH2
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All DBs
Position
complement(467132..467374)
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AA seq
80 aa
AA seq
DB search
MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQLARQGQAKLQQAEQRV
QILLSDNEDASLTPFTPDNE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaaaaatgaggcgcccgccagctttgaaaaggcgctgagcgagctggaacag
attgtaacccgtctggaaagtggcgacctgccgctggaagaggcgctgaacgagttcgaa
cgcggcgtgcaactggcacgtcaggggcaggccaaattacaacaagccgaacagcgcgtg
caaattctgctgtctgacaatgaagacgcctctctaaccccttttacaccggacaatgag
taa
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