Escherichia coli SMS-3-5 (environmental): EcSMS35_0802
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Entry
EcSMS35_0802 CDS
T00672
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EcSMS35_0802 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecm03400
]
EcSMS35_0802 (uvrB)
DNA repair and recombination proteins [BR:
ecm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EcSMS35_0802 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EcSMS35_0802 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SBDS_domain_II
IF2_N
UB2H
DUF1844
PRDA1_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACB18192
UniProt:
B1LM70
LinkDB
All DBs
Position
805374..807395
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPR
FTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattccgcttttaaaccttctggcgatcagccagaggcg
attcgacgtctcgaagaggggctggaagatggcctggcgcaccagacgttacttggcgtg
actggctccgggaaaaccttcaccattgccaatgtcattgctgaccttcagcgccctacc
atggtacttgcgcccaacaaaacgctggcggcccagttgtatggcgaaatgaaagaattc
ttcccggaaaacgcggtggagtatttcgtctcctactacgactattatcagccggaagcc
tatgtaccgagttccgacaccttcattgagaaagatgcctcggtaaacgaacatatcgag
cagatgcgtttgtccgccaccaaagcgatgctggagcggcgtgatgtggttgtggtggca
tcggtttccgcgatttatggtctgggcgatcctgatttatatctcaagatgatgctccat
cttacggtcggtatgattatcgatcagcgcgcgatcctgcgtcgactggcggagctgcaa
tacgctcgtaatgatcaagccttccagcgcggtactttccgcgttcgtggggaggtgatt
gacatcttcccggcagaatcggatgacattgcacttcgcgtggaactgtttgacgaggaa
gtggaacgattgtcgttatttgatccgctcaccgggcagattgtttccactattccacgt
tttaccatctacccgaaaacgcactacgtcacaccgcgcgagcgcattgtgcaggcgatg
gaagaaattaaagaagaactggctgccagacgcaaggtgctgttggaaaacaacaaactg
ctggaagagcagcggctgacccagcgtacccagtttgatctggagatgatgaacgagctg
ggctactgttcggggattgaaaactactcgcgcttcctctccggtcgtggaccgggtgag
ccaccgccgacgctgtttgattacctgcctgccgatgggctgctggtcgtcgatgaatct
cacgttaccattccgcaaattggcggcatgtatcgcggtgaccgggcgcgtaaagagacg
ctggtggagtacggcttccgcctgccatcagcgctggataaccgtccgctgaaatttgaa
gagttcgaagcattagcgccgcaaaccatctatgtttcggcgacgccgggtaattacgag
ctggaaaaatccggcggcgatgtggtggatcaggtggtgcgtccaacaggcttacttgac
ccgattattgaagtgcgtccggtagcgacacaggtcgatgatcttctatcggagattcgt
cagcgagcggcaattaacgaacgcgtactggttacaactctgaccaagcggatggcggaa
gatctcactgaatatctcgaagaacacggtgagcgcgtgcgttatcttcactcagatatc
gacaccgtcgaacgtatggagattatccgcgacttgcgtctgggtgagttcgacgtattg
gtagggatcaacttactgcgcgaaggtctggatatgccggaagtgtcgctggtggcgatc
ctcgacgctgacaaagaaggcttcctgcgttccgaacgttcgttgatccagaccattggt
cgtgcggcacgtaacgttaacggtaaagcgattctctacggcgataagatcaccccatca
atggcgaaagcgattggcgaaaccgaacgtcgccgcgagaaacagcagaagtacaacgag
gaacacggcattacgccgcaaggcttgaacaagaaagtggtcgatatcctggcgctgggg
cagaacattgccaaaaccaaagcgaagggcagaggaaaatcgcgcccgattgttgagcca
gataatgtgccgatggatatgtcgcctaaagcgttgcagcagaagatccatgaactggaa
gggttgatgatgcaacacgcgcagaatctggagttcgaagaagcggcgcaaattcgtgac
cagttgcatcagctgcgtgagctgtttattgccgcgtcgtga
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