Escherichia coli SMS-3-5 (environmental): EcSMS35_0873
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Entry
EcSMS35_0873 CDS
T00672
Name
(GenBank) transcriptional regulator, TetR family
KO
K23778
TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecm03000
]
EcSMS35_0873
Transcription factors [BR:
ecm03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
EcSMS35_0873
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_31
TetR_N
TetR_C_6
TetR_C_28
Motif
Other DBs
NCBI-ProteinID:
ACB20185
UniProt:
B1LMZ8
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All DBs
Position
880055..880591
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AA seq
178 aa
AA seq
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MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDELLLEAF
SRFTEIMSRQYQAFFSDVSDAPGACQAITDMIYSSQVATPDNMELMYQLYALASRKPLLK
TVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERVAG
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgcgctaacgatccacaacggcgagaaaaaattatccaggccacgctggaggcg
gtgaaactttacggaatacatgctgttacgcaccgcaaaattgctacccttgccggggta
ccgttgggatcgatgacttactatttttcaggaattgatgagttgttgctggaggcgttc
agccgttttactgagatcatgtcccggcaatatcaggcattttttagcgatgttagtgat
gctccgggcgcatgccaggctatcaccgatatgatctacagctcacaggttgcaacgccg
gataacatggagctgatgtaccagctctacgcgctggctagccgaaaaccgctattaaaa
acggtaatgcaaaactggatgcagcgcagtcagcaaacgctcgaacaatggtttgaaccc
ggaaccgcccgcgcgcttgatgcgtttattgaggggatgacgctgcattttgtcaccgac
cgtaagccgctatcgcgcgaggagattttgaggatggttgagagggttgcagggtag
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