Escherichia coli SMS-3-5 (environmental): EcSMS35_0917
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Entry
EcSMS35_0917 CDS
T00672
Name
(GenBank) transcriptional regulator MlrA
KO
K21089
MerR family transcriptional regulator, activator of the csg genes
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
EcSMS35_0917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecm03000
]
EcSMS35_0917
Transcription factors [BR:
ecm03000
]
Prokaryotic type
Helix-turn-helix
MerR family
EcSMS35_0917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MlrA_C
MlrA_helical
MerR_1
MerR
HTH_17
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
ACB16887
UniProt:
B1LN42
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All DBs
Position
complement(925124..925855)
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AA seq
243 aa
AA seq
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MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNG
VQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERGQDYPAQTLTTHL
FIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARKKQGKDALVVGWNIHDTTRLWL
EGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGENRTSAQQQQLTSWQEQGHDIFP
LGI
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcgctttacacaattggtgaagtggcgttgctttgtgatattaaccctgtcacgtta
cgcgcgtggcagaggcgttacggattgctgaaaccgcaacggacagacggcggtcatcgg
ctgttcaacgatgccgatattgaccggatccgcgagatcaaacgctggatcgacaacggc
gtgcaggtcagcaaagtaaaaatgctgctcagtaatgaaaatgttgatgtgcagaacggc
tggcgcgatcagcaagaaacattactgacttacctgcaaagcggcaatctgcatagcctg
cgaacgtggatcaaagagcgcggtcaggattaccccgcccagacactcaccacacatctg
tttattcctctgcgccgacgacttcagtgtcaacaaccgactctccaggcgctgctagcg
atcctcgacggcgtactgatcaactacatcgccatctgtctggcttcggcacgtaaaaaa
cagggtaaagatgcgctggtggttggctggaatattcacgataccacccgtctgtggctg
gagggctggattgccagtcaacaaggatggcgcattgatgtcctcgcccactcgctcaat
caactacgccctgaactgttcgaaggccgtacattgctggtgtggtgcggtgaaaatcga
acctccgcccaacagcagcaactcaccagttggcaggaacaaggccatgatattttccca
ctcggcatttaa
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