Escherichia coli SMS-3-5 (environmental): EcSMS35_0974
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Entry
EcSMS35_0974 CDS
T00672
Symbol
gatR
Name
(GenBank) galactitol utilization operon repressor
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecm03000
]
EcSMS35_0974 (gatR)
Transcription factors [BR:
ecm03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
EcSMS35_0974 (gatR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
GntR
HTH_11
CoA_trans
HTH_PafC
HTH_5
FeoC
CggR_N
DUF977
bact_SelB_WH_2nd
MarR
DsrD
Motif
Other DBs
NCBI-ProteinID:
ACB17902
UniProt:
B1LN98
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Position
984349..985128
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AA seq
259 aa
AA seq
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MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK
IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMT
AKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGA
DGIDAVNGITTFNEGYSISGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDA
VSEVDKLALQKTRVKLITV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaattcattcgagcgaaggaataagatcatccaattagtgaatgaacaggga
accgtgcttgttcaggatctggcgggagtatttgctgcctcggaagcgacaatccgtgcc
gatttgcgctttctcgaacaaaaaggcgtggttacgcgctttcatggcggtgcggcgaaa
ataatgtccggtaatagtgaaaccgagacccaggaagtcgggtttaaagagcgatttcag
ctcgccagcgcgccaaaaaacagaatagcgcaggcggcagtcaaaatgatccacgaaggg
atgaccgttattctcgacagcggaagtacgacaatgcttatcgccgaaggattaatgacc
gccaaaaatatcacggtgattaccaacagtctcccggcagcatttgccctttccgaaaat
aaagacattactctggtcgtctgcggtggcacggtccgccataaaacgcgctcgatgcat
ggctccattgctgagcgttcattgcaggatattaatgccgatttaatgtttgtcggtgct
gatggtattgatgcggttaatggtattacgacctttaatgaaggctattcgattagcggg
gcgatggtcacagccgcaaataaagtgattgccgttctcgattcatcgaaatttaatcgt
cgcggttttaatcaggtactgccaatcgaaaaaattgacattattattaccgatgatgct
gtgtctgaggtggataaactggcattgcagaagacacgggtaaaattaattacggtgtag
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