Escherichia coli SMS-3-5 (environmental): EcSMS35_1000
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Entry
EcSMS35_1000 CDS
T00672
Name
(GenBank) polysaccharide biosynthesis/export protein
KO
K01991
polysaccharide biosynthesis/export protein
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm02020
Two-component system
ecm02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EcSMS35_1000
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
EcSMS35_1000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecm02000
]
EcSMS35_1000
Transporters [BR:
ecm02000
]
Other transporters
Pores ion channels [TC:
1
]
EcSMS35_1000
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SLBB_2
Poly_export
Wza_C
SLBB
JmjC_2
Motif
Other DBs
NCBI-ProteinID:
ACB19666
UniProt:
B1LNY1
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Position
1018324..1019463
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AA seq
379 aa
AA seq
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MMKSKMKLMPLLVSVTLISGCTVLPGSNMSTMGKDVIKQQDADFDLDKMVNVYPLTPRLI
DQLRPRPNVARPNMTLESEIANYQYRVGPGDVLNVTVWDHPELTTPAGQYRSSSDTGNWV
QPDGTMFYPYIGKVHVVGKTLAEIRSDITGRLATYIADPQVDVNIAAFRSQKAYISGQVN
KSGQQAITNVPLTILDAINAAGGLTDTADWRNVVLTHNGREERISLQALMQNGDLNQNRL
LYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSGMTLTEALGNAEGIDMTTSNASGIFV
IRPLKGEGGRNGKIANIYQLDMSDATSLVMATEFRLQPYDVVYVTTAPVSRWNRLINQLL
PTISGVRYMTDTASDIHNW
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatccaaaatgaaattgatgccattattggtgtcagtaaccttgataagcggt
tgcacagtacttccgggcagcaatatgtcgacgatggggaaagacgtcatcaaacagcag
gacgctgatttcgatctcgacaaaatggtgaatgtttatccgttgaccccgcgcctgatt
gatcaattacgcccacgcccgaatgtagcgcgccccaatatgacgctggaaagtgagatc
gcgaattatcagtatcgcgtcgggccgggagacgttcttaatgtcaccgtctgggatcac
ccggaactcaccacgccagccggtcagtaccgcagctccagcgacaccggcaactgggta
cagcctgacggcaccatgttctacccgtatatcggcaaagttcacgtggtggggaaaacg
ctcgctgaaatccgcagtgatattaccgggcgcttagcgacgtacatcgctgacccgcag
gtggacgttaatatcgccgccttccgctcgcaaaaagcctatatctccggtcaggtgaat
aaatccggtcaacaggcgatcaccaacgtgccactgaccattctcgacgccatcaacgcc
gcaggtggcctgaccgacaccgctgactggcgcaacgtggtgctaacacacaatggtcgt
gaagagcgcatttctttgcaggcgctgatgcaaaacggcgacctcaatcagaaccgactg
ctttaccccggcgatattctctacgtgccgcgtaatgatgatctgaaagtgtttgtgatg
ggtgaagtgaagaaacagagcaccctgaaaatggactttagcggcatgaccctgactgaa
gccctgggcaatgctgaaggtatcgacatgaccacctccaacgccagcggcatctttgtc
attcgtccgttgaaaggcgagggcgggcgtaacggcaagattgccaatatctaccagctg
gatatgtccgatgccacgtcgctggtgatggcgacagaattccgcctgcaaccttatgac
gtggtgtatgtcaccaccgccccggtatcccgctggaaccgtctgatcaatcagttgctg
ccaactattagcggtgtccgttacatgacggatacagccagcgacattcataactggtaa
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