Escherichia coli SMS-3-5 (environmental): EcSMS35_1221
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Entry
EcSMS35_1221 CDS
T00672
Name
(GenBank) gram-negative porin family
KO
K14062
outer membrane protein N
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecm02000
]
EcSMS35_1221
Transporters [BR:
ecm02000
]
Other transporters
Pores ion channels [TC:
1
]
EcSMS35_1221
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Porin_4
Motif
Other DBs
NCBI-ProteinID:
ACB18254
UniProt:
B1LQP5
LinkDB
All DBs
Position
complement(1224155..1225318)
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AA seq
387 aa
AA seq
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MKRKVLAMLVPALLVAGAANAAEIYNKNGNKLDLYGKVDARHTFSDNPGDDGDETIIELG
FKGETQITDQLTGYGQALTKTKASDTEGSDNTYVKLAFAGLKFGEMGSFDYGRNYGVIYD
VEAWTDMLPVFGGDSYTWTDNFMAGRANGVATYRNSDFFGLVEGLNFALQYQGNNEGSNA
GEDQEGTKNGHEDVRFQNGDGFGLSTSYDFDFGLSLGAAYSNSDRTNSQVALGGYHYNEY
SKFAGGDTAEAWTFGAKYDANNVYLAMMYAETRNMTPYGNVGIANKTQNFEAVAQYQFDF
GLRPSLAYVYSKGKDLGGNDYNNNGHQEYVDQDLVNYVEIGATYYFNKNFSTYVDYKINL
LDKDDDFYDNNGIATDDVVGVGLVYQF
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaaagttctggcaatgctggtcccggcgttattagttgctggcgcagcaaat
gcggctgaaatttataataaaaatggcaataaactggatctgtacggaaaagttgatgct
cgtcatactttttccgataaccctggcgatgacggcgatgaaactatcatcgagttaggc
ttcaaaggtgagacccaaattacagatcagttaactggttatggtcaagcactgaccaaa
acaaaggctagcgacactgaaggttctgataatacttatgtcaaacttgcttttgcaggt
ctgaagttcggcgagatgggctcctttgactatggtcgtaactatggtgtgatttacgac
gttgaagcctggacagatatgcttcctgtattcggcggcgactcctatacctggactgat
aacttcatggcaggccgtgcaaatggggtagctacttaccgcaatagtgatttcttcggt
ctggtggaaggtctgaactttgcattgcagtatcaaggtaacaacgaaggcagcaatgca
ggagaagatcaagaaggtactaaaaatggtcacgaagacgttcgcttccagaacggtgat
ggttttggtctttccacttcatatgactttgacttcggtttgagcttaggtgccgcttac
tcaaactctgaccgtaccaattctcaagtagctcttggcgggtatcactacaatgaatac
agcaaatttgctggtggtgatacagctgaagcatggacatttggtgcaaaatacgacgcc
aacaatgtttatcttgcaatgatgtatgctgaaacccgcaatatgacaccatatggtaat
gtgggtatcgcaaataaaacccagaactttgaagctgtagcacagtatcagttcgatttt
ggtctgcgcccatctcttgcatatgtttattcaaaaggcaaagacctcggcggtaacgac
tataacaacaatggtcatcaagagtatgttgatcaggatctggtcaactatgttgaaatt
ggagcgacctactatttcaataagaacttctcaacatatgttgactataaaataaacttg
ttggataaagatgacgatttctatgacaacaatggcatcgcaacagatgacgttgttggt
gtgggcttagtctaccagttctaa
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