Escherichia coli SMS-3-5 (environmental): EcSMS35_1226
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Entry
EcSMS35_1226 CDS
T00672
Symbol
vsr
Name
(GenBank) very short patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecm03400
]
EcSMS35_1226 (vsr)
DNA repair and recombination proteins [BR:
ecm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
EcSMS35_1226 (vsr)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
ACB19451
UniProt:
B1LQP9
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All DBs
Position
1228452..1228922
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AA seq
156 aa
AA seq
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MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV
IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR
GREKLTDEALSERLEEWICGEGASAQIDTQGIHLLA
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgttcacgataaggccactcgcagcaaaaatatgcgcgcgattgccacgcgt
gatacggcgatagagaagcgcctcgccagtctgttaaccgggcagggcctggcgtttcgc
gttcaggacgccagtctgcccggacgcccggattttgtcgttgatgaatatcgctgcgtg
atatttacccacggctgcttctggcatcatcatcactgctatctgtttaaagtgcctgcg
actcgaaccgagttctggctggagaagataggtaaaaatgttgagcgcgatcgccgcgat
atcagtcgcttgcaggaactcggctggcgcgtattgattgtctgggagtgcgcgttacgt
gggcgcgagaagctgacggatgaagcgcttagcgagcgtctggaagagtggatctgcggc
gaaggtgccagcgcgcagatcgacacgcaggggattcatttactcgcttga
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