Escherichia coli SMS-3-5 (environmental): EcSMS35_1230
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Entry
EcSMS35_1230 CDS
T00672
Name
(GenBank) diguanylate cyclase (GGDEF) domain protein
KO
K21085
diguanylate cyclase [EC:
2.7.7.65
]
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
EcSMS35_1230
Enzymes [BR:
ecm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
EcSMS35_1230
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHASE7
GGDEF
MCP-like_PDC_1
RRM_2
UDPGP
Motif
Other DBs
NCBI-ProteinID:
ACB16772
UniProt:
B1LQQ3
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All DBs
Position
1231371..1233047
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AA seq
558 aa
AA seq
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MENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANA
LDKHLQYNVDKLIFLRNGMREALVALLDFTSLRNAVTEFEQHRDEHAWQIELNRRRTLPV
NGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVST
QPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDS
NNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRE
LALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLW
ALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTH
QHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILP
GASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRR
LYLAKQAGRNRVCASDNA
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccagagctggttgaaaaaactcgcacgccgcctggggcctggtcatgtcgtt
aatctctgctttatcgtggtattgcttttttccaccttgctcacctggcgtgaagtagtg
gtgctggaagatgcctatatctccagccagcgtaatcatctggaaaacgtagccaacgcg
ctcgataagcatttgcagtataacgtcgacaaactgatctttttgcgtaatggcatgcgc
gaagctctcgtagcgctactggatttcacttcactgcgtaatgctgtaaccgagttcgaa
cagcatcgcgacgagcacgcctggcaaattgaactcaaccgacggcgcactctgccagtt
aatggtgtgtcggatgcattagtcagcgaggggaatctcctgtctcgcgaaaatgaaagc
ctcgacaatgaaattaccgctgcactggaagttggttacttgctgcgactggcgcacaac
tcctcgtcgatggttgaacaggcgatgtatgtctcgcgtgccggattttacgtttcgacg
cagccgaccttgtttacgcgcaatgttccaacgcgttattacggctatgtcacccaaccc
tggtttatcggccattcgcaacgagaaaatcgtcaccgcgcggtacgctggtttacttcg
caaccggaacacgccagcaatactgaaccgcaggttaccgtcagtgttccggtagacagt
aataactactggtatggcgtgctggggatgagtattcctgtgcgtactatgcagcaattt
ttaagaaacgccatcgataaaaacctcgatggtgagtatcagctctatgacagtaagctg
agatttttgacctcttccaatcctgaccatccaacagggaatatttttgatcctcgtgaa
ctggccttgctggcgcaggcgatggaacatgacacgcggggcggcattcgtatggacagt
cgctatgttagctgggaacgtctggaccatttcgacggtgtgctggtgcgcgtccatacg
ctaagcgaaggcgtgcgcggcgatttcggtagtatcagcattgcattaaccctgctgtgg
gcgctctttaccaccatgttactcatctcctggtatgtgattcgccggatggttagcaac
atgtatgttctgcaaagctcgttgcagtggcaggcgtggcacgacaccttaacccgttta
tataatcgtggcgcactgtttgaaaaagcccgtccgctcgcgaaattgtgtcagacgcac
caacatcctttttctgtcattcaggtcgatcttgaccattttaaagcgattaatgaccgc
tttggtcatcaggcgggcgaccgtgttctttctcatgctgccggattaattagcagttcc
ttgcgtgcgcaggacgttgccgggcgggtcggtggtgaggagttttgtgtgattctgcca
ggcgcgagtctgacggaggctgcggaagtcgcagaacgtattcgcctgaagttaaatgaa
aaagagatgctgattgctaagagtacgacgatacgcatcagtgcctcgttgggggttagt
agcagcgaggaaaccggtgattatgattttgaacaactccagtcactggctgaccgtcgg
ctttatctcgctaaacaggccgggcgtaatcgggtatgcgcgagcgataacgcttaa
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