Escherichia coli SMS-3-5 (environmental): EcSMS35_1333
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Entry
EcSMS35_1333 CDS
T00672
Name
(GenBank) transcriptional regulator, rpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecm03000
]
EcSMS35_1333
Transcription factors [BR:
ecm03000
]
Prokaryotic type
Helix-turn-helix
Other families
EcSMS35_1333
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ACB19663
LinkDB
All DBs
Position
complement(1322584..1323453)
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AA seq
289 aa
AA seq
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MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAALALEANVSEPTVNRFCRSMDT
RGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKSAINR
AVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVV
LISHTGRTKNLVELAQLARENDAMVIALTSAGTPLAREATLAITLDVPEDTDIYMPMVSR
LAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKQLLNLSDDR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgctggaaaaaatccagtctcagctggaacatttgagcaaatcagagcgcaaa
gttgccgaggtcattctggcttcgcccgataacgcgatccattcgagtattgctgctctg
gcgctggaagccaatgttagcgaaccgacggtgaatcgtttctgtcgcagcatggacacg
cgcggttttcctgattttaaacttcatctggcacaaagtctggcgaatggcactccctat
gttaatcgcaacgtcaatgaagatgacagcgttgaatcatacacggggaaaatatttgag
tccgcaatggcaacgctcgatcatgtccgtcattcactggataaatctgccatcaaccgc
gccgtcgacttgctcactcaggcaaaaaaaatcgcctttttcggattaggctcttcagcc
gccgttgcccacgatgcgatgaataagttctttcgttttaatgttccggtggtgtactcc
gatgatattgtgctgcaacgcatgagttgtatgaattgtagcgacggagacgtggtggtg
ctgatttctcacacgggaagaacaaaaaatctggtcgagctggcgcagctggcacgcgaa
aacgacgccatggtgattgccctcacctctgcgggtaccccgctcgcccgggaagcaacg
ctggctattaccctcgacgtaccggaagatactgacatttatatgcccatggtttctcga
cttgcacagctgaccgtgatagatgtgctggcgacaggatttactttgcggcgcggtgca
aaattcagagataacttgaagcgggtcaaggaagcgctgaaggaatcgcgttttgataag
cagttacttaatttaagtgacgatcgctaa
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