Escherichia coli SMS-3-5 (environmental): EcSMS35_1342
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Entry
EcSMS35_1342 CDS
T00672
Symbol
exoX
Name
(GenBank) exodeoxyribonuclease X
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EcSMS35_1342 (exoX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecm03400
]
EcSMS35_1342 (exoX)
DNA repair and recombination proteins [BR:
ecm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EcSMS35_1342 (exoX)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
ACB17307
UniProt:
B1LD28
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All DBs
Position
complement(1333311..1333973)
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AA seq
220 aa
AA seq
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MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPISPQAMAIHRITEAMVAD
KPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKLARRLWPGIKYSNMALYKT
RKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQMADITGRPSLMTTFTFGKYR
GKAVSDVAERDPGYLRWLFNNLDSMSPELRLTLKHYLENT
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcattatcgatacagaaacctgcggtttgcagggagggatcgttgagattgcc
tctgttgatgtcattgacggaaaaatcgtcaaccccatgagccacctggtgcgccccgat
cgtcctattagtccacaagcgatggcgattcatcgcatcaccgaagccatggtcgccgat
aaaccgtggattgaagatgtgatcccgcactattacggtagtgaatggtatgtcgcgcac
aacgccagctttgaccgccgcgtactgcctgagatgcccggtgagtggatttgcactatg
aaactggcccgtcgtttgtggccagggatcaagtatagcaatatggcgttatataaaaca
cggaagctcaatgtacagacgccgccgggcctgcatcatcaccgcgcgttgtatgactgt
tatatcaccgctgcgttgcttatcgatattatgaacacctccggctggacggcagaacag
atggccgatatcaccggacgtccgtcgttgatgacgaccttcacctttggcaaataccgt
ggcaaagcggtttccgacgttgccgaacgcgatccgggctatctgcgctggttgtttaat
aacctggacagcatgagcccggagctgcgtttaacactgaaacattatctggaaaatact
taa
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