Escherichia coli SMS-3-5 (environmental): EcSMS35_1384
Help
Entry
EcSMS35_1384 CDS
T00672
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecm03016
]
EcSMS35_1384 (rnd)
Enzymes [BR:
ecm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EcSMS35_1384 (rnd)
Transfer RNA biogenesis [BR:
ecm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EcSMS35_1384 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ACB15912
UniProt:
B1LD69
LinkDB
All DBs
Position
1372101..1373228
Genome browser
AA seq
375 aa
AA seq
DB search
MNYQMITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGI
SDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFAS
MVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAAL
DECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVR
EEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQTLPEEALPQPMLNLMDM
PGYRKAFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGE
LMAEALHNLLQEYPQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattaccaaatgattaccacggacgatgcgctggcttctttgtgtgaagccgtccgt
gcctttccggcgatagccctggatactgaatttgttcgtacgcgcacctattacccgcag
ctaggtctaattcaactttttgatggtgagcatctggcgctaattgatcctctcgggatc
tccgactggtcaccactgaaagcgatcctgcgcgatccgtccatcacaaaatttctccat
gcgggcagtgaagatctggaagtgttcctcaatgtctttggcgaattaccacaacccctg
attgacacgcaaatccttgctgccttctgcggacgcccgatgtcatggggttttgcttcc
atggtggaagagtattccggcgttacgctggacaagagtgaatcgcgcaccgactggctg
gccagaccgctgaccgaacgtcagtgtgaatacgcagcggcggatgtctggtatttgtta
ccgatcaccgccaagcttatggtagaaacggaggcctccggctggctacctgcggcgctg
gatgaatgccgcctgatgcaaatgcgtcgtcaggaagtcgttgcgccggaagatgcctgg
cgtgatatcaccaatgcctggcagttacgcacacgccaactggcctgtctgcaactgtta
gccgattggcgactgcgcaaggcgcgggagcgcgatctggcagtgaactttgtcgtgcgt
gaagagcatttgtggtctgtagcgcgttatatgccgggaagtttaggcgaactggacagc
ctgggtttatccggtagcgaaatccgctttcacggtaaaacgctgctggcgctggtggaa
aaagcgcagacattgccggaagaggccttaccgcagccgatgcttaacctgatggacatg
ccgggttatcgtaaagcgtttaaagcgattaagtcgctgattactgacgtgagcgaaacg
cacaagatcagcgccgaattgctggcatcgcgtcggcaaatcaaccaactgctgaactgg
cactggaaactgaaaccgcagaacaatttgccggagctgatttccggctggcgtggtgag
ctgatggcggaagcattacacaatttattgcaggaatatccgcagtaa
DBGET
integrated database retrieval system
