Escherichia coli SMS-3-5 (environmental): EcSMS35_1656
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Entry
EcSMS35_1656 CDS
T00672
Symbol
lsrB
Name
(GenBank) autoinducer-2 ABC transporter, periplasmic autoinducer-2-binding protein LsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm02010
ABC transporters
ecm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EcSMS35_1656 (lsrB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EcSMS35_1656 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecm02000
]
EcSMS35_1656 (lsrB)
Transporters [BR:
ecm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
EcSMS35_1656 (lsrB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
DUF6848
Motif
Other DBs
NCBI-ProteinID:
ACB19798
UniProt:
B1LF99
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All DBs
Position
complement(1643549..1644571)
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AA seq
340 aa
AA seq
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MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV
TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK
PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK
EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV
AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIQGVG
QVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgacacttcatcgctttaagaaaatcgccttacttagcgctcttggcattgccgcaatc
tctatgaatgtgcaggccgcagagcgtattgcatttattcccaaactggttggcgtggga
ttttttaccagcggtggcaacggcgcacaacaagcgggtaaagagctgggcgttgatgtg
acctacgacgggccgacagaacccagtgtttctggtcaggtacagttgattaataacttc
gtcaatcagggttataacgccattatcgtttctgcggtttcgcctgatggcttgtgtccg
gcactgaaacgcgccatgcaacgtggtgtgagagtgctgacctgggactctgataccaaa
ccggagtgccgctcttactacattaatcagggaacgcccgcccagttgggaggtatgttg
gtggatatggcggcgcgtcaggtgaataaagacaaagccaaagtcgcgtttttctactca
agccccaccgttacggaccaaaaccagtgggtgaaagaagcgaaagcgaaaatcgccaaa
gagcatccaggctgggaaattgtcactacgcagtttggctataacgatgccactaaatcg
ttacaaaccgcagaaggaatattaaaagcctatagcgatctcgacgccattatcgccccc
gatgccaatgccctgcccgctgccgcacaagccgcagaaaacctgaaaaatgacaaagtt
gcgattgtcggattcagtacgccaaatgtgatgcgtccatatgtggaacgcggcacggtg
aaagaatttggcctgtgggatgtggttcagcaaggcaaaatatcagtttatgtcgcggat
gcattattgaaaaaaggatcaatgaaaacgggcgacaagctggatattcagggcgtaggt
caggttgaagtctcgccaaacagcgttcagggctatgactacgaagcggatggtaatggc
atcgtactgttaccggagcgcgtgatattcaacaaagagaatatcggcaaatacgatttc
tga
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