Escherichia coli SMS-3-5 (environmental): EcSMS35_1657
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Entry
EcSMS35_1657 CDS
T00672
Symbol
lsrD
Name
(GenBank) autoinducer-2 ABC transporter, permease protein LsrD
KO
K10557
AI-2 transport system permease protein
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm02010
ABC transporters
ecm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EcSMS35_1657 (lsrD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EcSMS35_1657 (lsrD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecm02000
]
EcSMS35_1657 (lsrD)
Transporters [BR:
ecm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
EcSMS35_1657 (lsrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
PspB
Motif
Other DBs
NCBI-ProteinID:
ACB16868
UniProt:
B1LFA0
LinkDB
All DBs
Position
complement(1644583..1645575)
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AA seq
330 aa
AA seq
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MRIRYGWELALAALLVIEIVAFGAINPRMLDLNMLLFSTSDFICIGIVALPLTMVIVSGG
IDISFGSTIGLCAIALGVLFQSGVPMPLAILLTLLLGALCGLINAGLIIYTKVNPLVITL
GTLYLFAGSALLLSGMAGATGYEGIGGFPMAFTDFANLDVLGLPVPLIIFLICLLVFWLW
LHKTHAGRNVFLIGQSPRVAVYSAIPVNRTLCALYAMTGLASAVAAVLLVSYFGSARSDL
GASFLMPAITAVVLGGANIYGGSGSIIGTAIAVLLVGYLQQGLQMAGVPNQVSSALSGAL
LIVVVVGRSVSLHRQQIKEWLARRANNPLP
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattcgctacggttgggaactggctcttgccgcactgctcgttattgagattgtt
gcatttggtgcaattaacccgcggatgttagatctcaatatgttgctgttcagcaccagt
gactttatctgcattggcattgtcgccctaccgctgacgatggtgattgtcagtggtggg
atcgatatttcgtttggttcgaccatcggcctctgcgccattgcattgggcgtactgttt
caaagtggtgtgccgatgccgctggcgattcttctgaccttactgctcggcgcattgtgc
gggttgatcaacgccggattaattatctataccaaagttaacccgctggtgattacgctt
ggcacgctgtatctgtttgccggaagcgccctgctgctttccgggatggccggagcgacg
gggtacgaaggtattggtggattcccgatggcgtttacagatttcgctaacctggatgtg
ctgggactccccgttccgctgattatcttcctgatatgtctcctcgttttctggctctgg
ctgcataaaacccatgccggacgtaacgtgtttttaattgggcaaagcccgcgtgtggcg
gtttatagcgcgattccggtaaaccgcaccttgtgtgcgctctatgccatgacggggctg
gcgtctgcggtcgccgctgtgctgctggtatcgtattttggttcagcacgttccgatctc
ggtgcgtcgtttctgatgcccgccatcaccgccgtagtgctcggcggtgccaatatttat
ggtggttctggttccattatcggcaccgccattgcggttttattagtgggatatttgcaa
caaggtttgcaaatggcaggagtgccaaatcaggtgtccagcgccctttccggtgcgcta
cttatcgtcgttgtcgtaggtcgttccgttagcctgcatcgccagcaaattaaagagtgg
ctggcgcgtcgggccaataacccattgccataa
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integrated database retrieval system
