Escherichia coli SMS-3-5 (environmental): EcSMS35_1686
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Entry
EcSMS35_1686 CDS
T00672
Name
(GenBank) putative ABC transporter periplasmic-binding protein yddS precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EcSMS35_1686
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecm02000
]
EcSMS35_1686
Transporters [BR:
ecm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
EcSMS35_1686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
OpuAC
Motif
Other DBs
NCBI-ProteinID:
ACB16965
UniProt:
B1LFC9
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All DBs
Position
1689668..1691218
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AA seq
516 aa
AA seq
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MKRSILFRPTLLAIVLATTMPVAHAAVPKDMLVIGKAADPQTLDPAVTIDNNDWTVTYPS
YQRLVQYKTDGDKGSTDVEGDLASSWKASDDQKEWTFTLKNDAKFADGTPVTAEAVKLSF
ERLLKIGQGPAEAFPKDLKIDAPDEHTVRFTLSQPFAPFLYTLANDGASIINPAVLKEHA
ADDARGFLAQNTAGSGPFMLKSWQKGQQLVLVPNPHYPGNKPNFKRVSVKIIGESASRRL
QLSRGDIDIADALPVDQLNALKQENKVNVAEYPSLRVTYLYLNNSKAPLNQADLRRAISW
STDYQGMVNGILSGNGKQMRGPIPEGMWGYDATAMQYNHDETKAKAEWDKVTSKPTSLTF
LYSDNDPNWEPIALATQSSLNKLGINVKLEKLANATMRDRVGKGDYDIAIGNWSPDFADP
YMFMNYWFESDKKGLPGNRSFYENSEVDKLLRNALATTDQTQRTRDYQQAQKIVIDDAAY
VYLFQKNYQLAMNKEVKGFVFNPMLEQVFNINTMSK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaagagatcgattttgtttcgtcctacattgctcgcgatcgtccttgccacaacaatg
ccggttgcgcacgccgccgtaccgaaagatatgctggtgatcggtaaagctgccgaccca
caaaccctcgacccagcggtgacaattgataataacgactggacagtgacctacccgtct
tatcagcgactggttcagtacaaaacggacggtgataaaggctcaaccgacgttgaaggc
gatctggcaagtagctggaaagcgtctgacgatcaaaaagagtggacgttcaccctgaaa
aacgacgctaaatttgccgatggcacacctgtcactgccgaagcagtaaaactctctttt
gagcggttactaaaaatcggccaggggccagcagaagcatttcccaaagatttaaagatt
gatgctcccgacgaacatacagtgaggtttacccttagccagccattcgcaccgttcctc
tacacgctggcgaatgacggtgcatccattatcaatccggcggtcttaaaggagcatgcg
gcggatgatgcccgtggtttcctcgcgcaaaataccgctggctccggaccgtttatgctg
aaaagctggcaaaaaggtcagcaattagttctggtgccaaatccgcattaccccggcaat
aaaccgaatttcaaacgggtatcggtaaaaattatcggtgaaagtgcttcccgtcgcctg
cagctctcccgtggcgacattgacattgccgatgcgctgccggtggatcaactcaacgca
ctgaagcaggaaaacaaagtcaatgtggcagagtatccgtcactgcgcgtcacctatctg
tatctgaataacagcaaagcgccacttaatcaggcggatctgcgtcgggccatttcctgg
tctaccgattatcagggtatggttaacggcattctgagtggtaacggaaaacaaatgcgc
ggcccgattccggaaggcatgtggggatacgatgcgacggcaatgcaatacaaccatgac
gaaacgaaagccaaagccgaatgggataaagtgacgagcaaacccaccagcctgacgttt
ctctattctgataatgatccgaactgggagcctattgctctggcgacacaatccagtctc
aacaagctgggcatcaatgtgaagctggaaaagctggcgaacgccaccatgcgcgacaga
gtgggtaaaggtgattacgacatcgcgattggcaactggagtccggattttgccgacccg
tatatgtttatgaattactggtttgagtccgacaaaaaaggtctgccgggtaaccgctcg
ttctatgaaaacagtgaggtcgataagttactgcgcaatgcgctagcgaccaccgaccag
acgcagcgtacccgggactaccagcaggcacagaaaatcgtcattgatgacgctgcttat
gtgtatctgttccagaaaaactaccaactggcgatgaacaaagaggtgaaaggctttgtg
ttcaatcccatgctggaacaggtcttcaatatcaataccatgagtaaataa
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