Escherichia coli SMS-3-5 (environmental): EcSMS35_1783
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Entry
EcSMS35_1783 CDS
T00672
Symbol
abgR
Name
(GenBank) transcriptional regulator AbgR
KO
K14057
LysR family transcriptional regulator, regulator of abg operon
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecm03000
]
EcSMS35_1783 (abgR)
Transcription factors [BR:
ecm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
EcSMS35_1783 (abgR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
Motif
Other DBs
NCBI-ProteinID:
ACB18859
LinkDB
All DBs
Position
complement(1800805..1801713)
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AA seq
302 aa
AA seq
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MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT
LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ
HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP
AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF
LSILPEEMGCDPLHGQGLVMLPVSEILPKATYYLIQRRDSRQTPLTASLITQFRRECGYL
QS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcttttcaggtaaaaattcatcaaattcgggcttttgttgaagtggctcgtcagggc
agcattcgcggagcgagccgaatgttgaatatgtcgcaaccggcactgagtaaatctatt
caggaactggaagaagggttggcggcacaactcttttttcgccgtagtaaaggcgtgacg
ttaactgatgccggtgaaagtttttatcagcacgccagtcttattcttgaagagctgcgc
gcagcgcaagaggatattcgccaacgacaagggcaactggcagggcaaattaatatcggc
atgggggccagtatttcccgcagtctgatgccagctgtcatatctcgttttcatcagcag
catccgcaggtaaaagtacgcattatggaagggcaactggtgtcgatgattaatgaattg
cgccagggagaactggatttcaccatcaatacctattatcagggaccctacgaccacgaa
tttacttttgagaaattactggaaaagcaattcgcgatcttttgccgcccgggacatccc
gccattggtgcccgttcgatcaaacagttactggactacagctggacaatgccgacgcca
cacggcagctactacaaacagttgagtgaattgcttgacgatcaggcgcaaacgccacag
gtcggcgtagtctgcgagacgttctcagcctgtatcagtctggtggcaaaaagcgatttt
ctcagcatactacctgaagaaatgggctgcgatcccttgcacggacaggggctggtgatg
ttgccggttagcgaaattttaccgaaagcgacctattatttgattcagcggcgtgatagt
cgccagacaccactgaccgcgtcattaatcacgcaatttcggcgagaatgcggctatctg
caaagttaa
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