Escherichia coli SMS-3-5 (environmental): EcSMS35_2015
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Entry
EcSMS35_2015 CDS
T00672
Name
(GenBank) transcriptional regulator, TetR family
KO
K22041
TetR/AcrR family transcriptional regulator, copper-responsive repressor
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecm03000
]
EcSMS35_2015
Transcription factors [BR:
ecm03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
EcSMS35_2015
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Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_13_2
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
ACB16885
UniProt:
B1LI33
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Position
2037678..2038310
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AA seq
210 aa
AA seq
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MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEF
TNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFAAIANCFTSKDTPAGCFMI
NNCTTLSPDSGDIGNTLKSRHAMQERTLQQFLCQRQARGEIPTHCDVTHLAEFLNCIIQG
MSISAREGASLEKLMQIARTTLRLWPELVK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgactcaacacaatgtgtaaaaaaaagccgtggccgcccaaaagtgttcgac
agggatgccgcgcttgataaggccatgaaattgttctggcaacacggttatgaagcgact
tctcttgcggacctcgttgaagcgaccggagctaaagcgcccacgctatacgcggaattt
accaacaaagaggggttattccgcgccgtactcgaccgctatatcgatcgttttgccgct
aagcatgaagcacagctgttttgtgaagagaaaagcgtggagtctgcgctggctgactat
tttgctgccatcgccaactgctttaccagcaaagacaccccggctggctgctttatgatc
aacaactgcaccaccctctccccggattccggagatatcggcaatacgctgaaatcacgc
catgcgatgcaagagcgcactttgcagcagtttttatgtcaacgacaagcgcgcggggaa
atcccgacccactgtgacgtgacgcatctggcagaattccttaattgtattattcagggg
atgtcgatcagcgcacgcgaaggtgcatcgctggaaaaactgatgcagattgcccgaacg
actttgcgtttatggcccgaactggtgaaataa
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