Escherichia coli SMS-3-5 (environmental): EcSMS35_2112
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Entry
EcSMS35_2112 CDS
T00672
Symbol
rutR
Name
(GenBank) transcriptional regulator RutR
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecm03000
]
EcSMS35_2112 (rutR)
Transcription factors [BR:
ecm03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
EcSMS35_2112 (rutR)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
ACB16472
UniProt:
B1LIZ2
LinkDB
All DBs
Position
complement(2121926..2122564)
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AA seq
212 aa
AA seq
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MTQGAVKITGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFP
SKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEML
AGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQV
EAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaggcgcagtgaaaataacgggtaaacgttcgcgcgcagtaagcgcgaagaaa
aaagcgattcttagcgcagcactggacactttttcacaattcggttttcacggcacaagg
ctggagcagatcgcagagttggcaggcgtttcaaaaaccaatctgctgtattacttcccg
tcaaaagaggcgctgtatatagccgtactgcggcagattctcgatatctggctggcaccg
ttaaaagcgtttcgtgaagatttcgccccgctggcggcgatcaaagagtacatccgtctg
aagctggaagtctcacgcgattatccgcaggcttcacgtctgttttgtatggagatgctg
gcaggcgcgccgttgttaatggatgaactgacgggcgatttgaaggcattaattgatgag
aaatcggcgctgattgccggttgggtaaaaagcggcaaactcgcgccgattgatccgcag
catttgatttttatgatttgggcttccactcaacattacgccgatttcgcccctcaggtg
gaggcggtgacaggcgcgacgttgcgcgatgaggtatttttcaatcaaacggttgaaaac
gtgcagcggattattattgaggggattcgaccacgttaa
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