Escherichia coli SMS-3-5 (environmental): EcSMS35_2227
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Entry
EcSMS35_2227 CDS
T00672
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EcSMS35_2227 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecm01007
]
EcSMS35_2227 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecm03016
]
EcSMS35_2227 (serS)
Enzymes [BR:
ecm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
EcSMS35_2227 (serS)
Amino acid related enzymes [BR:
ecm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
EcSMS35_2227 (serS)
Transfer RNA biogenesis [BR:
ecm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
EcSMS35_2227 (serS)
Prokaryotic type
EcSMS35_2227 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Filament
CENP-F_leu_zip
DUF3450
UPF0242
Cep57_CLD_2
Motif
Other DBs
NCBI-ProteinID:
ACB18911
UniProt:
B1LJX0
LinkDB
All DBs
Position
complement(2246505..2247797)
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AA seq
430 aa
AA seq
DB search
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ
AKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDN
VEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFM
LDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEV
PLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPED
SMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCS
NVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLR
PYMNGLEYIG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcccaatctgctgcgtaatgagccagacgcagtcgctgaaaaactggcacgc
cggggctttaagctggatgtagataagctgggcgctcttgaagagcgtcgtaaagtattg
caggtcaaaacggaaaacctgcaagcggagcgtaactcccgatcgaaatccattggccag
gcgaaagcgcgcggggaagatatcgagcctttacgtctggaagtgaacaaactgggcgaa
gagctggatgcagcaaaagccgagctggatgctttacaggctgaaattcgcgatatcgcg
ctaaccatccctaacctgcctgcagatgaagtgccggtaggtaaagacgaaaatgacaac
gttgaagtcagccgctggggcaccccgcgtgagtttgactttgaagttcgtgaccatgtg
acgctgggtgaaatgcactctggcctcgactttgcagccgcagttaagttgactggttcc
cgctttgtggtaatgaaagggcagattgctcgcatgcaccgcgcactgtcgcagtttatg
ctggatctgcataccgaacagcatggctacagtgagaactatgttccgtacctggttaac
caggacacgctgtacggtacggggcaactgccgaaatttgctggcgatctgttccatact
cgtccgctggaagaagaagcagacaccagtaactatgcgctgatcccaacggcagaagtt
ccgctgaccaacctggtacgcggtgaaatcatcgatgaagatgatctgccaattaagatg
accgcccacaccccatgtttccgttctgaagctggttcatatggtcgtgacactcgtggt
ctgatccgtatgcaccagttcgacaaagttgaaatggtgcagatcgtgcgcccggaagac
tcaatggcggcgctggaagagatgaccggtcatgcggaaaaagtcctgcagctgctgggc
ctgccgtaccgcaaaatcatcctttgcaccggcgacatgggctttggtgcttgcaaaact
tacgacctggaagtatggatcccggcgcaaaacacctaccgcgagatctcttcatgctct
aacgtctgggatttccaggcacgtcgtatgcaggcacgctgccgcagcaagtctgacaag
aaaacccgtctggttcataccctgaacggttctggtctggctgttggccgtacgctggtt
gcggtaatggaaaactatcagcaggctgatggtcgtattgaagtaccagaagttctacgt
ccgtatatgaacggactggaatatattggctaa
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