Escherichia coli SMS-3-5 (environmental): EcSMS35_2424
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Entry
EcSMS35_2424 CDS
T00672
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecm03016
]
EcSMS35_2424 (rnz)
Enzymes [BR:
ecm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
EcSMS35_2424 (rnz)
Transfer RNA biogenesis [BR:
ecm03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
EcSMS35_2424 (rnz)
Prokaryotic type
EcSMS35_2424 (rnz)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
ACB16640
UniProt:
B1LLM3
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All DBs
Position
2470969..2471904
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AA seq
311 aa
AA seq
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MKRDELMELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNP
GKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQPLTIYGPQGIREFVETALRISGSWTDY
PLEIVEIGAGEIFDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPL
FQALKAGKTIMLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAALDLAKGVNVMVHEAT
LDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIFPAT
ELANDFTVFNV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgtgatgaactcatggaattaatttttttaggtacttcagccggtgtgccaacc
cgtacgcgcaatgtcacggcaatattgcttaacctgcaacatccgacccagagcggtctt
tggttgtttgactgcggtgaaggcacccagcatcagctactgcataccgcctttaaccct
ggaaaactggacaagatttttatcagtcaccttcatggcgatcatctctttggtttaccc
ggcttgctgtgcagtcgttctatgtctggtattgtccaacccttaacgatttatggtccg
caaggtatccgtgaatttgtggagaccgcgctgcggattagcggctcatggaccgattat
ccgctggaaattgtcgaaattggcgctggcgaaattttcgatgatggcctgcgcaaagtg
accgcttatccgctggaacacccactggaatgctatggctatcgtattgaagaacatgat
aaaccgggtgcattaaatgcccaggcattaaaagctgctggcgtaccgcctggcccactg
tttcaggcattaaaagcgggcaaaacaatcatgctggaagatggaaggcagattaacggc
gcagattacttagccgctccagtgccaggtaaagcgctcgctattttcggcgataccggc
ccctgcgatgccgcacttgacctggctaaaggtgtcaatgtcatggtgcacgaagcgacg
ctggatataaccatggaagccaaagccaatagtcgcggccacagctctacacgccaggct
gcgacactggcccgtgaggctggagtcggtaagctaatcattacccacgtcagctcgcgc
tatgatgacaaaggttgtcagcacctgttacgtgaatgtcggtcaattttcccggcgact
gaactggcgaatgatttcaccgtgtttaacgtttaa
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