Escherichia coli SMS-3-5 (environmental): EcSMS35_2784
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Entry
EcSMS35_2784 CDS
T00672
Symbol
csiR
Name
(GenBank) gab operon transcriptional repressor CsiR
KO
K15735
GntR family transcriptional regulator, carbon starvation induced regulator
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecm03000
]
EcSMS35_2784 (csiR)
Transcription factors [BR:
ecm03000
]
Prokaryotic type
Helix-turn-helix
GntR family
EcSMS35_2784 (csiR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FCD
GntR
HTH_41
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
ACB19156
LinkDB
All DBs
Position
2869289..2869951
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AA seq
220 aa
AA seq
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MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLREALSQLVAERLVTVVN
QKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEADVLAKAHLLSKLEACDAS
EKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAARYRFIWLRRTVLSVEMLEDKH
DQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMAGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaccattacgtctctggatggctatcgctggctgaagaacgatattattcgcggtaat
tttcaaccggatgaaaaattacggatgagtttgctgacatcgcgttatgcacttggcgtt
gggccgttacgggaagctctttcgcaactggtggcggaacggctggtcacggtggtgaat
caaaaagggtatcgggtggcgtctatgtcagagcaggagctgctcgatattttcgacgcc
cgcgccaatatggaagcgatgctggtcagtctggcgattgcccgcggtggcgatgaatgg
gaggcagacgttctcgcaaaagcgcatctgctcagtaagctggaggcctgtgacgccagt
gagaaaatgcttgatgagtgggatcttcgtcatcaggcgtttcatactgcaattgtggcg
ggctgtggttctcactatttgctgcaaatgcgtgaacggttgtttgatctggcggcgcgc
tatcgatttatctggctgcggcgaacagtgctttcggtggagatgctggaggataaacac
gatcagcaccagaccctgactgcggcggtactggcgcgagataccgcgcgcgccagtgag
ttaatgcgccagcatttactgacgccaattcccattatccagcaggcgatggctggcaat
taa
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