Escherichia coli SMS-3-5 (environmental): EcSMS35_3027
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Entry
EcSMS35_3027 CDS
T00672
Symbol
xerD
Name
(GenBank) tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecm03036
]
EcSMS35_3027 (xerD)
Chromosome and associated proteins [BR:
ecm03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
EcSMS35_3027 (xerD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF2064
Motif
Other DBs
NCBI-ProteinID:
ACB17887
UniProt:
B1LR76
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Position
complement(3117647..3118543)
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AA seq
298 aa
AA seq
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MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLA
ERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVER
LLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVP
LGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaggatctggcacgcatcgagcagtttcttgatgctctgtggctggaaaaaaat
ctggctgaaaatacgttgaacgcataccgtcgcgatctgtcaatgatggtggagtggttg
catcaccgcgggttgacgctggcgacggcgcaaagtgacgatttgcaggcattactggca
gaaaggctggagggcgggtataaagccaccagctcagcgcgtttgctgagtgcagtgcgc
cgattgttccagtatctttatcgcgaaaagtttcgtgaagacgatcccagtgcgcatctc
gcttcaccgaaattgccccagcgtttgccaaaagatttaagcgaagcgcaggtcgaacgt
ttattgcaggcaccattaattgatcagccactggagctacgcgataaagccatgcttgaa
gtgttgtatgctaccggactgcgtgtctctgaactggtcgggctgacaatgagtgatatc
agcctgcgtcagggcgtagtgcgggtcattggtaaaggcaacaaagagcgcctggtgccg
ttaggtgaagaggcggtttactggctggaaacctatctggaacatgggcgtccgtggctg
ctgaatggtgtgtcaattgacgtgttgtttcccagccagcgtgcgcagcagatgacgcga
cagaccttctggcaccgcattaaacattatgccgtgctggcgggtatcgacagcgaaaag
ctgtcaccgcatgtgttgcgtcacgcttttgccactcacttattaaatcatggtgcggat
ttacgcgtggtgcagatgctactgggccacagcgatctctccaccacgcaaatttatacg
catgtcgctaccgagcgtctgcggcaacttcatcaacagcatcacccgcgggcgtga
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