Escherichia coli SMS-3-5 (environmental): EcSMS35_3031
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Entry
EcSMS35_3031 CDS
T00672
Symbol
ygfZ
Name
(GenBank) tRNA-modifying protein ygfZ
KO
K06980
tRNA-modifying protein YgfZ
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecm03016
]
EcSMS35_3031 (ygfZ)
Transfer RNA biogenesis [BR:
ecm03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
EcSMS35_3031 (ygfZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YgfZ_barrel
GCV_T
DUF6237
Peptidase_S41_N
Sortase
Motif
Other DBs
NCBI-ProteinID:
ACB19826
UniProt:
B1LD99
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Position
3120113..3121093
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AA seq
326 aa
AA seq
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MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLA
AHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGV
AGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGE
AELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKF
RGANKRALWLLTGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDM
EPDSIFRVRDDANTLRIEPLPYSLEE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcttttacaccttttcctccccgtcagcctacggcttctgcccgtttgccactgacg
ctgatgacgcttgatgactgggcgcttgccaccattactggcgcggacagcgaaaaatat
atgcagggtcaagtgacagcagatgtcagccagatgacagaagatcagcacctgctcgcc
gcccattgcgacgccaaaggcaaaatgtggagcaacttacgtctgttccgcgacggcgat
ggctttgcatggattgaacggcgcagcgtgcgtgaaccgcagctgactgaactgaaaaaa
tatgcggtgttctctaaagtgacaatcgcgccagacgacgagcgtgtgctgcttggtgtt
gccggttttcaggcgcgcgccgcgctggcaaatctctttagtgaactgccttcgaaagaa
aaacaggtagttaaagaaggcgcgaccactttgctatggtttgaacacccggcagaacgt
ttcctgatcgtaaccgatgaagccactgccaatatgctgaccgataaactgcgcggtgaa
gcggaactgaacaatagccaacagtggctggcattaaacattgaagcgggtttcccggtg
attgatgccgccaacagcgggcagtttatcccacaggcgaccaacctccaggcgctgggc
ggcattagctttaaaaaaggctgctataccggacaagagatggtggcgcgagctaaattc
cgtggtgccaacaaacgcgcgctctggttgctgacaggtagtgccagccgactgccggaa
gctggtgaagacttagagctgaaaatgggcgagaactggcgtcgtaccggtacggtgctg
gctgcggtcaaactggaagatggtcaggtcgtggtacaggtcgtcatgaataacgatatg
gaaccggacagcatcttccgcgtgcgtgacgatgcgaatacattgcgtatcgagccgctg
ccgtattcgctcgaagagtaa
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