Escherichia coli SMS-3-5 (environmental): EcSMS35_3114
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Entry
EcSMS35_3114 CDS
T00672
Symbol
rafA
Name
(GenBank) alpha-galactosidase
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm00052
Galactose metabolism
ecm00561
Glycerolipid metabolism
ecm00600
Sphingolipid metabolism
ecm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
EcSMS35_3114 (rafA)
09103 Lipid metabolism
00561 Glycerolipid metabolism
EcSMS35_3114 (rafA)
00600 Sphingolipid metabolism
EcSMS35_3114 (rafA)
Enzymes [BR:
ecm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
EcSMS35_3114 (rafA)
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Paralog
GFIT
Motif
Pfam:
Melibiase
Glyco_hydro_36N
Glyco_hydro_36C
Melibiase_2
Motif
Other DBs
NCBI-ProteinID:
ACB18022
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Position
3199851..3201977
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AA seq
708 aa
AA seq
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MVSKYCRLSSPRSDLIIKTRPHAEIIWWGSALKHFSPDDCASLERPVANGRLDIDTPLTL
MAENALGLFSSPGLEGHRNGLDASPVFYTVDVEHTENTLRLTSEDSVAGLRLVSELVMTP
SGILKVRHALTNLREGDWQINRFAITLPLAERAEEVMAFHGRWTREFQPHRVRLTHDAFV
LENRRGRTSHEHFPALIVGTPGFSEQQGEVWAVHLGWSGNHRMRCEAKTDGRRYVQAEAL
WMPGEKALRKNETLYTPWLYACHSADGLNGMSQQYHRFLRDEIIRFPEQKPRPVHLNTWE
GIYFNHNPDYIMQMAERAAALGVERFIIDDGWFKGRNDDRAALGDWYTDEQKYPNGLMPV
IKHVKSLGMEFGIWVEPEMINPDSDLFRLHPDWVLSMPGYSQPTGRYQYVLNLNIPEAFA
YIYERFLWLLGEHPVDYVKWDMNRELVQAGHEGRAAADAQTRQFYRLLDLLRERFPHVEF
ESCASGGGRIDFEVLKRTHRFWASDNNDALERCTIQRGMSYFFPPEVMGAHIGHRRCHAT
FRQHSIAFRGLTALFGHMGLELDPVAADAKESDGYRRYALLYKEWRQLIHTGVLWRVDMP
DPSIQVQGVVSPDQSQALFMISQLAMPDYTLPGILRFPGLAAEVRYRLRVIDHPDLQVVG
EGGHTMRKLPVWMNQSLEASGEWLAQGGIQLPVLDPESAILIALERAV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaaagtactgcagactgagcagtcctcgctctgatttaattattaaaacccgt
ccacatgcagaaattatctggtggggctctgcactgaaacatttctcaccggatgactgt
gccagcctggaaagaccggttgcgaatggtcgtctggatattgatacgccactaacactg
atggctgaaaatgccctgggactttttagctctccgggactggaaggacacaggaatggg
ctggatgcatctcctgttttttatacagttgacgtggaacataccgaaaacactctgaga
cttaccagtgaagattcggtagccggcctgcgtctggtcagcgagctggtgatgacgcca
tcaggaattctgaaagttcgtcatgcactgaccaacctcagagagggggactggcagata
aatcgtttcgccatcactttacctttagcggaacgtgcggaagaagtcatggcttttcac
ggacgctggactcgtgaatttcagccgcacagggtacgtctcactcatgatgcttttgtt
ctggaaaatcgcagagggcggacatctcatgagcattttccggcgctgattgtcggcacg
ccaggcttctcggaacaacagggagaggtgtgggctgtgcatctggggtggagtggaaat
caccgcatgagatgtgaggcaaaaactgacggcaggcgttacgttcaggctgaggctctg
tggatgccgggtgagaaggctctcaggaagaatgaaaccctgtacaccccgtggctatat
gcctgccactctgcggatggcctgaatggaatgagtcagcaataccatcgttttttgcgt
gatgaaattatccgtttccctgagcaaaaaccccgccctgtacatctcaatacctgggaa
ggtatttatttcaatcacaatcctgattacatcatgcagatggctgagcgtgcagcagca
ctgggcgttgaacgtttcattattgatgatggctggtttaaaggacgtaacgatgaccgc
gcggctctgggcgactggtataccgatgaacagaaatacccgaacgggctgatgccggtt
attaaacatgtgaaatctctcggtatggaatttggcatatgggttgagccggaaatgatt
aacccggattctgacctgtttcgtcttcatcctgactgggtattgtcaatgcctggatat
tcccagccaaccggaagatatcagtatgttcttaacctgaatattccagaggcctttgct
tacatttatgaacgtttcttatggttactgggagaacatccggttgattatgtgaaatgg
gacatgaatcgtgagcttgtacaggcagggcatgaaggccgtgcggcagcagatgcacag
acccgtcagttctatcgattgcttgatctcctccgtgaacgttttccacatgttgagttt
gagtcctgtgcttccggtggggggcgtattgacttcgaagtcctgaaacgcacacaccgg
ttctgggcatctgacaataatgatgccctggagcgctgcaccatacaacgtggcatgagt
tactttttccctcctgaggtgatgggggcgcatattggccatcgccgctgccatgcaact
ttccggcagcacagcatcgcttttcgtgggctgacggcattgttcggccatatggggctg
gagctggatccggtggccgcagatgcgaaggaatctgacggttatcgccggtatgccttg
ctctataaagaatggcgacaactgattcatacaggagttctctggcgtgtggatatgcca
gatccttcgatacaggttcagggagtcgtcagccctgatcagtctcaggcactttttatg
atcagccagcttgcaatgccggattacaccttaccaggcatacttcgttttcccggtctg
gcggcggaagtgcgttaccggcttcgggttattgatcacccggacctccaggtggttggt
gaaggcggtcataccatgcgcaaattacctgtctggatgaatcagagccttgaggccagt
ggtgaatggctggcacagggagggattcagctccccgtactggatccggagagtgcgatt
ttgatagcacttgaaagagctgtgtga
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