Escherichia coli SMS-3-5 (environmental): EcSMS35_3251
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Entry
EcSMS35_3251 CDS
T00672
Name
(GenBank) conserved hypothetical protein
KO
K10939
accessory colonization factor AcfD
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4092
Peptidase_M60
M60-like_N
Trypan_PARP
CooC_C
Motif
Other DBs
NCBI-ProteinID:
ACB19012
UniProt:
B1LEE0
LinkDB
All DBs
Position
complement(3322667..3327223)
Genome browser
AA seq
1518 aa
AA seq
DB search
MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTP
EPTPDPEPTPEPIPDPEPTPEPEPEPVPTKTGYLTLGGSQRVTGATCNGESSDGFTFKPG
EDVTCVAGNTTIATFNTQSEAARSLRAVEKVSFSLEDAQELAGSDDKKSNAVSLVTSSNS
CPANTEQVCLTFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTSPV
VPVTTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSQGYGVAGVNYYTNSGRGV
TGENGEFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSTTGQ
NNTRVVPEDVRKVFAEYPNVINEIINLSLSNGATLGEGEQVVNLPNEFIEQFNTGQAKEI
DTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVFHDSTNFYG
STGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVRPENVT
RETATFNLPFISLGQVGDGKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPDDM
KNFMENVLRYLSNDRWLPDAKSNMTVGTNLDTVYFKKHGQVTGNSAAFGFHPDFAGISVE
HLSSYGDLDPQEMPLLILNGFEYVTQVGNDPYAIPLRADTSKPKLTQQDVTDLIAYMNKG
GSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQRRSTPIWV
YERYPAVDGKPPYTIDDTTKEVIWKYQQENKPDDKPKLEVASWQEEVEGKQVTQFAFIDE
ADHKTPESLAAAKKRILDAFPGLEECKDSDYHYEVNCLEYRPGTGVPVTGGMYVPQYTQL
SLNADTAKAMVQAADLGTNIQRLYQHELYFRTNGRKGERLSSVDLERLYQNMSVWLWNKI
EYRYENDKDDELGFKTFTEFLNCYANNAYDGGTQCSAELKQSLIDNKMIYGEGSKAGMMN
PSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGAVSAEGEEVTETINLYSNPTKWFAG
NMQSTGLWAPAQQEVSIKSNAKVPVTVTVALADDLTGREKHEVALNRPPRVTKTYSLDAS
GTVKFKVPYGGLIYIKSDSKEEKSANFTFTGVVKAPFYKDGKWKNDLKSPAPLGELESAS
FVYTTPKKNLEASNYKGGLKQFAEDLDTFASSMNDFYGRDGESGKHRMFTYEALTGHKHR
FTNDVQISIGDAHSGYPVMNSSFSPNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATE
VANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNGQAWARGGAGDRLLMYAQLKEWAE
KNFDIKQWYPEGSLPAFYSEREGMKGWNLFQLMHRKARGDDVGNDKFGNRNYCAESNGNA
ADTLMLCASWVAQTDLSAFFKKWNPGANAYQLPGATEMSFEGGVSQSAYNTLASLDLPKP
EQGPETINQVTEHKMSAE
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaatttaaatataagaaatcgcttttagcggctattttgagcgcaaccctg
ttagccggttgtgatggcggtggttccggatcttcctccgatacgccgcctgtagattct
ggaacagggtctttgccggaagtgaaacctgatccaacaccaaacccggagccgacgcct
gagccaacgccggacccagagcctacgccagaaccgatacctgatcctgaaccaacacca
gaaccggagccagaacctgttcctacgaaaacgggttatctgaccctgggcggaagccag
cgggtaactggtgctacctgtaatggtgaatccagcgatggctttacatttaaacctggc
gaggacgttacttgcgtggcgggtaacacgacaattgccaccttcaacactcagtcagaa
gctgcgcgtagcttgcgtgcggttgaaaaagtgtcgtttagccttgaggacgcgcaagaa
ctggcgggctccgatgacaagaaaagcaatgcggtttcgctggtaacgtccagtaacagc
tgtccggcgaatacagaacaggtttgtctgacgttctcctcggtgatcgagagtaaacgc
ttcgactcgctgtataagcaaatcgatctggcaccggaagagttcaaaaagctggtcaat
gaagaggtggaaaacaatgctgcgaccgataaagcgccatccactcatacttcaccggtc
gtgcccgtcaccacgccgggaacaaaaccggatctgaacgcttccttcgtgtcggctaac
gcggaacagttttatcagtatcaacccactgaaatcattctctctgaaggtcgactggtc
gatagccagggatatggtgttgctggcgtcaactactacaccaattcaggccgtggcgtg
acaggggaaaatggtgaattttcctttagctggggcgaaaccatctcctttggtatcgat
acctttgaactgggttcagtgcgcggcaataagtcgaccattgcgctgactgaactgggt
gatgaagttcgcggggcgaatattgatcagcttattcatcgctattcgacgaccgggcaa
aataatacccgtgttgttccggaggatgtacgcaaggtctttgccgaatatcccaacgtg
atcaacgagattatcaatctctcgttatccaacggtgcgacgctgggggaaggtgagcaa
gtcgttaatctgcctaacgaatttattgagcagtttaatacgggtcaggccaaagagatc
gataccgcgatttgtgcgaaaaccgatggttgtaacgaggctcgctggttctcgctgacg
acgcgcaatgttaatgacggccagattcagggcgttatcaacaagctgtggggcgtggat
acgaactacaaatctgtcagcaagttccatgtattccatgactccaccaacttctatggc
agcacgggtaatgcgcgcggtcaggcggtggtgaatatctccaacgcggccttcccgatt
ctgatggcgcgtaatgataaaaactactggctggccttcggcgagaaacgggcctgggat
aaaaatgagctggcgtacattactgaagcgccttccattgtgcgaccagagaacgtgaca
cgcgaaacagccaccttcaacctgccgtttatttcgctggggcaagtgggcgatggcaag
ctgatggttatcggtaacccacactacaacagcatcctgcgttgcccgaacggttacagc
tggaacgggggcgttaataaagatgggcagtgtacgctcaacagcgacccggatgacatg
aagaacttcatggagaacgtgctgcgctatctgtcaaatgatcgctggttgccggatgca
aaatccaatatgaccgtgggtactaacctggacacggtgtatttcaaaaaacacgggcag
gttacaggaaatagtgctgcgttcggctttcatccggattttgcgggtatctctgttgag
catttaagtagctatggcgatctcgacccgcaggaaatgccgctgctgatcctcaacggc
tttgagtatgtgactcaggttggtaacgatccttatgcaatcccgctgcgtgcagatacc
agcaaaccgaagctgacccagcaggatgtgaccgatttgatcgcctatatgaacaaaggt
ggatcggtgctgatcatggaaaacgtgatgagcaatcttaaggaagagagcgcatctggc
tttgtacgtctgcttgatgccgcaggtttgtcgatggcgcttaacaagtcggtagtaaat
aacgatccgcaaggctacccggaccgcgttcgtcaacgacgttcaacgccaatttgggtc
tatgagcgttatccggctgtcgatggtaaaccaccgtataccattgatgacaccacgaaa
gaagttatctggaaatatcagcaagaaaacaaacctgatgacaaaccgaagctggaagtt
gccagctggcaggaagaagttgagggtaaacaggtaactcaattcgcctttatcgatgaa
gccgaccacaaaacgcctgagtcactggctgcggcgaagaagagaattctggacgcgttc
ccagggctggaagagtgtaaggattctgactaccactatgaggtcaactgtctggaatat
cgtcctggcacgggggttccggttactggtggcatgtatgttccacagtatacgcaacta
agccttaacgccgacactgcgaaagcgatggtgcaggctgcggatttaggcaccaacatt
cagcgtctgtatcagcatgagctttacttccgtaccaatggtcgcaaaggtgagcgtctg
agcagcgtcgatctggaacgtctgtaccagaacatgtcggtctggctgtggaataaaatt
gaatatcgctatgaaaacgacaaggatgacgagctgggctttaaaacgttcaccgagttc
ctgaactgttacgccaacaatgcttatgatggtggcacgcagtgctccgcagagctgaaa
caatcgctgatcgataacaagatgatctacggtgaaggcagcaaagcgggcatgatgaac
ccgagctatccgcttaactatatggaaaaaccgctgacgcgcctgatgctggggcgttcc
tggtgggatctgaacatcaaggttgatgtcgagaagtatccgggggcggtatcggctgaa
ggtgaggaggttactgaaaccatcaacctgtactcgaatccgaccaaatggtttgcgggt
aacatgcagtctactggcctgtgggctccggctcagcaggaagtcagcattaagtccaat
gcgaaagtccctgtgactgttaccgtggcgctggctgacgacctgaccgggcgtgagaag
catgaggttgcgctgaaccgtccgccaagagtgactaaaacatactctctggatgctagc
ggcacggtgaagttcaaggttccttacggtggtctgatttatatcaagagcgacagtaaa
gaggagaaatcagccaacttcacctttactggcgtggtaaaagcgccgttctataaagac
ggtaaatggaaaaacgacctgaaatcccctgcgccgttgggtgagctggagtctgcgtcg
ttcgtctataccacgccgaagaagaaccttgaggccagcaattacaagggcggtctgaaa
caattcgctgaggatctggatacctttgccagctcgatgaatgacttctacggtcgtgat
ggcgaaagcggtaagcaccggatgtttacctatgaagcattgacggggcacaaacatcgt
ttcaccaacgatgtgcagatctccatcggtgatgcgcactctggttatccggtgatgaac
agcagcttctcgccgaacagcaccacgctgccgacgacgccgctgaacgactggctgatc
tggcacgaagtagggcacaacgctgcagaaacgccgctgactgtaccgggcgcaactgaa
gtggcgaacaacgtgctggcgctgtacatgcaggatcgttatctcggcaagatgaaccgt
gtcgctgacgatattaccgttgcgccggaatatctggaggagagcaacggtcaggcatgg
gcgcgtggcggtgcgggtgaccgtctgctgatgtacgcgcagctgaaggaatgggcagag
aaaaactttgatatcaaacagtggtatccagaaggctctctgccagcgttctacagcgag
cgtgaagggatgaaaggctggaacctgttccagttgatgcaccgtaaagcacgcggcgat
gatgttggcaatgacaaatttggcaacagaaactactgtgccgaatccaacggtaacgct
gccgacacgctgatgctgtgtgcatcctgggtcgctcagacggacctttccgcattcttt
aagaaatggaatccgggcgcgaatgcttaccagttgccgggagcgacagagatgagcttc
gagggcggtgtgagccagtcggcttacaacacgctcgcgtcactcgatctgccgaaaccg
gaacagggaccggaaaccattaatcaggttaccgagcataagatgtctgccgagtaa
DBGET
integrated database retrieval system
