Escherichia coli SMS-3-5 (environmental): EcSMS35_3301
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Entry
EcSMS35_3301 CDS
T00672
Name
(GenBank) transcriptional regulator, GntR family
KO
K13637
GntR family transcriptional regulator, uxu operon transcriptional repressor
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecm03000
]
EcSMS35_3301
Transcription factors [BR:
ecm03000
]
Prokaryotic type
Helix-turn-helix
GntR family
EcSMS35_3301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_41
HTH_11
HTH_DeoR
DnaD_N
HTH_24
Rrf2
Rv2949c-like
RRF_GI
Motif
Other DBs
NCBI-ProteinID:
ACB20201
UniProt:
B1LF01
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All DBs
Position
3376491..3377240
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AA seq
249 aa
AA seq
DB search
MEQVITKRRYYDIGLQIEELLYSGVFKAGERLPSERELSERFNTSRTTIREAIIMLELKG
VLNVKQGSGIFFVDSTDKLNQKSLMPYSEIGPFELLQARQVIESNITGFAASQISFNELQ
ELKKIIRLQENAIAAESDKFEDLDHRFHSIIAEATQNRVLIKQAAELWRAVRTENPRWKK
LNYKYLHEKHLRLQWLEDHRAIFLALQQKDSELAREASWRHLENSKNELIKIFKQDASIS
DFDDFFFAR
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggttattacaaagcgccgctattacgatattggtctacagattgaagagctg
ctgtattcaggcgtatttaaggccggagaacgcttaccttcagaacgtgaactgagcgag
cggtttaataccagccgaactaccattcgtgaagccatcattatgctggaactgaaaggc
gtattgaatgtgaagcaagggtcagggattttctttgtcgactccaccgataagctcaac
cagaaatcattaatgccctattcagaaattggcccgtttgaactgttgcaggcgcgtcag
gtgattgagagcaatattactggttttgcagccagccagattagctttaacgagttacaa
gagttaaagaaaatcattagattgcaggaaaacgctatcgctgcggaaagtgataaattt
gaagacctggatcaccgatttcatagcattattgccgaagcgacgcaaaatcgggtactc
atcaaacaagctgctgaattatggcgggcagttcgtacagaaaacccccgctggaagaaa
cttaactacaagtacctgcatgaaaagcatttgcgtctgcaatggctggaagatcaccgg
gctattttccttgcgctacaacagaaagattcagagctcgccagggaagcatcctggaga
catctggaaaacagcaaaaatgaactgatcaaaatcttcaaacaagacgcttccatcagc
gattttgatgactttttcttcgctcgttaa
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