Escherichia coli SMS-3-5 (environmental): EcSMS35_3353
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Entry
EcSMS35_3353 CDS
T00672
Symbol
ttdR
Name
(GenBank) HTH-type transcriptional activator TtdR
KO
K21742
LysR family transcriptional regulator, transcriptional activator for ttdABT operon
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecm03000
]
EcSMS35_3353 (ttdR)
Transcription factors [BR:
ecm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
EcSMS35_3353 (ttdR)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
ParM_N
Motif
Other DBs
NCBI-ProteinID:
ACB18574
UniProt:
B1LF52
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All DBs
Position
complement(3430842..3431774)
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AA seq
310 aa
AA seq
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MLNSWPLAKDLQVLVEIVHSGSFSAAAATLGQTPAFVTKRIQILENTLATTLLNRSARGV
ALTESGQRCYEHALEILTQYQRLVDDVTQIKTRPEGMIRIGCSFGFGRSHIAPAITELMR
NYPELQVHFELFDRQIDLVQDNIDLDIRINDEIPDYYIAHLLTKNKRILCAAPEYLQKYP
QPQSLQELSRHDCLVTKERDMTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKG
IMLRSEWDVLPFLESGKLVRVLPEYAQSANIWAVYREPLYRSMKLRVCVEFLAAWCQQRL
GKPDEGYQVM
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatagctggcctttagccaaagatttgcaggtactggtagaaatcgtccacagc
gggagttttagcgccgcagcggcgacgcttgggcagacgcctgcatttgtcaccaagcgg
atccaaatccttgaaaatacgctggcaacaacgctgctgaaccgctccgctcgcggcgtg
gcgctgactgaaagtggccaacgttgttacgagcatgcgctggaaatcctcacccaatat
cagcgactggtcgatgacgtcacgcaaatcaaaacgcgcccggaggggatgattcgtatt
ggttgcagttttggttttgggcgcagccatattgcgccagccattaccgaactgatgcgc
aattatcctgagttacaggtgcattttgaattgttcgatcggcaaattgatttagtgcag
gataatattgatctggatattcgtattaatgacgaaattcctgattattatattgcgcat
ctgttaacgaaaaataaaagaatattatgcgcagcacctgagtatctgcaaaaatatccg
cagccacaatccttacaggaattaagtcgtcatgattgtctggtgaccaaagagcgcgat
atgacccacggaatatgggagttggggaacggtcaggagaaaaaatcggtgaaggtaagc
gggcatctttcctccaatagcggcgagatagtgttgcaatgggcgctggagggcaaaggg
attatgttgcgttccgagtgggatgtgttgccgtttctggagagtggcaaactggtgcga
gtattgccggagtatgcacaaagcgccaatatctgggctgtttaccgggagccgctctat
cgcagcatgaaattacgtgtctgcgtggaatttctggcggcatggtgccagcaacggctg
ggcaagcccgacgaaggctatcaggtcatgtaa
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