Escherichia coli SMS-3-5 (environmental): EcSMS35_3744
Help
Entry
EcSMS35_3744 CDS
T00672
Symbol
rpoH
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecm03021
]
EcSMS35_3744 (rpoH)
Transcription machinery [BR:
ecm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EcSMS35_3744 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
HTH_25
HTH_3
SANT_DAMP1_like
WASH_WAHD
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
ACB19545
UniProt:
B1LIC3
LinkDB
All DBs
Position
complement(3811178..3812032)
Genome browser
AA seq
284 aa
AA seq
DB search
MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAAKTLILSHLRF
VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDM
TFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDII
RARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaatgcaaagtttagctttagccccagttggcaacctggattcctacatc
cgggcagctaacgcgtggccgatgttgtcggctgacgaggagcgggcgctggctgaaaag
ctgcattaccatggcgatctggaagcagctaaaacgctgatcctgtctcacctgcggttt
gttgttcatattgctcgtaattatgcgggctatggcctgccacaggcggatttgattcag
gaaggtaacatcggcctgatgaaagcagtgcgccgttttaacccggaagtgggtgtgcgc
ctggtctccttcgccgttcactggatcaaagcagagatccacgaatacgttctgcgcaac
tggcgtatcgtcaaagttgcgaccaccaaagcgcagcgcaaactgttcttcaacctgcgt
aaaaccaagcagcgtctgggctggtttaatcaggatgaagtcgaaatggtggcccgtgaa
ctgggcgtaaccagcaaagacgtacgtgagatggaatcgcgtatggcggcacaggacatg
acctttgacctgtcttccgatgacgattccgacagccagccgatggctccggtgctctat
ctgcaggataaatcatctaactttgctgacggcatcgaagatgataactgggaagagcag
gcggcaaaccgtctgaccgacgcgatgcaaggtctggacgagcgtagccaggatatcatc
cgcgcgcgctggctggacgaagacaacaagtccacgttgcaggaactggctgaccgttac
ggtgtttccgctgagcgtgtgcgtcagctggaaaagaacgcgatgaaaaaattgcgcgct
gccattgaagcgtaa
DBGET
integrated database retrieval system
