Escherichia coli SMS-3-5 (environmental): EcSMS35_3889
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Entry
EcSMS35_3889 CDS
T00672
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter, periplasmic D-xylose-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EcSMS35_3889 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecm02000
]
EcSMS35_3889 (xylF)
Transporters [BR:
ecm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
EcSMS35_3889 (xylF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Phage_sheath_1C
Motif
Other DBs
NCBI-ProteinID:
ACB18436
UniProt:
B1LJC8
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All DBs
Position
3957289..3958281
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AA seq
330 aa
AA seq
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MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV
QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD
IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK
IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA
ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV
PSRLLTPIDVNKNNIKDTVVKDGFHKESEL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaagaacattctactcaccctttgcacctcacttctgcttaccaacgttgcg
gctcacgccaaagaagtcaaaataggtatggcgattgatgatctccgtcttgaacgctgg
caaaaagatcgagatatttttgtgaaaaaggcagaatctctcggcgcgaaagtatttgta
cagtctgcaaatggcaatgaagaaacacaaatgtcgcagattgaaaacatgattaaccgg
ggcgtcgatgttcttgttattattccgtataacggtcaggtattaagtaacgttgtaaaa
gaagccaaacaagaaggtattaaagtattagcttacgaccgtatgattaacgatgcggat
atcgatttttatatttctttcgataacgaaaaagtcggcgaactgcaggcaaaagccctg
gtcgatattgttccgcaaggtaattacttcctgatgggcggctcgccggtagataacaac
gccaagctgttccgcgccgggcaaatgaaagtattaaaaccttatgttgattccggaaaa
attaaagtcgttggtgaccaatgggttgatggctggttaccggaaaacgcattgaaaatt
atggaaaacgcgctaaccgccaataataacaaaattgatgctgtagttgcctcaaacgat
gccaccgcaggaggagcaattcaggcattaagcgcgcaaggtttatcagggaaagtagca
atttccggccaggatgcggatcttgcaggtattaaacgtattgctgccggtacgcaaact
atgacggtgtataaacctattacattgttggcaaatactgccgcagaaattgccgttgag
ttgggcaatggtcaggagccaaaagcggataccacactgaataatggcctgaaagatgtt
ccctcccgcctgctgacaccgatcgatgtgaataaaaacaacatcaaagatacggtagtt
aaagacggattccacaaagagagcgagctgtaa
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