Escherichia coli SMS-3-5 (environmental): EcSMS35_3957
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Entry
EcSMS35_3957 CDS
T00672
Symbol
rfaF
Name
(GenBank) lipopolysaccharide heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm00540
Lipopolysaccharide biosynthesis
ecm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
EcSMS35_3957 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecm01005
]
EcSMS35_3957 (rfaF)
Enzymes [BR:
ecm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
EcSMS35_3957 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
ecm01005
]
Core region
EcSMS35_3957 (rfaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
ACB19737
UniProt:
B1LK59
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All DBs
Position
4034924..4035970
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AA seq
348 aa
AA seq
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MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG
HGALEIGERRKLGHSLREKRYDRAYVLPNSFKSALVPFFAGIPHRTGWRGEMRYGLLNDV
RVLDKEAWPLMVERYVALAYDKGIMRTAQDLPQPLLWPQLQVSEGEKSYTCNQFSLSSER
PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQ
AWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVAAALNRPLVALYGPSSPDFTPPLSH
KARVIRLITGYHKVRKGDAAEGYHQSLIDITPQRVLEELNALLLQEEA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactggtgatcggcccgtcttgggttggcgacatgatgatgtcgcaaagtctc
tatcgcacgctccaggcgcgctatccccaggcgataatcgacgtgatggcaccggcatgg
tgccgtccattattatcgcggatgccggaagttaacgaagcgatccctatgcctctcggt
cacggagcgctggaaatcggcgaacgccgcaaactgggtcatagtctgcgtgaaaagcgc
tacgaccgcgcctacgtcttacccaactccttcaaatccgcattagtgcctttcttcgcg
ggtattcctcatcgcaccggctggcgcggcgagatgcgctacggtttacttaacgatgta
cgcgtgctcgataaagaagcctggccgctaatggtggaacgctatgtggcgctggcctat
gacaaaggcattatgcgtacagcacaagatctgccgcagccattgttatggccgcagttg
caggtgagcgaaggtgaaaaatcatatacctgtaatcaattttcgctctcatcagaacgt
ccgatgattggcttttgccccggagcggagtttggtccggcaaaacgctggccacactac
cactatgcggagctggcaaagcagctgattgatgaaggttatcaggtggttctgtttggc
tctgcgaaagatcatgaagcgggcaatgagattcttgccgctttaaatactgagcagcag
gcatggtgccggaacctggcaggggaaacacagcttgatcaagcggttatcctgattgca
gcctgtaaagccattgtcactaacgattctggcctgatgcacgttgcggcggcgctcaat
cgtccgctggttgccttgtatggtccgagtagcccggacttcacaccgccgctatcccat
aaagcacgcgtgatccgcctgattaccggctatcacaaagtgcgtaaaggtgacgcagcg
gagggttatcaccagagcttgatcgacattactccccagcgcgtactggaagaactcaac
gcgctattgttacaagaggaagcctga
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