Escherichia coli SMS-3-5 (environmental): EcSMS35_4020
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Entry
EcSMS35_4020 CDS
T00672
Name
(GenBank) putative type III cell invasion protein SipB
KO
K13285
invasin B
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
EcSMS35_4020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecm02000
]
EcSMS35_4020
Transporters [BR:
ecm02000
]
Other transporters
Pores ion channels [TC:
1
]
EcSMS35_4020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T3SSipB
Occludin_ELL
MtrG
AAA_14
PI3K_P85_iSH2
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
ACB17452
UniProt:
B1LKC0
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All DBs
Position
4097900..4099681
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AA seq
593 aa
AA seq
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MSAPITGQTITFEQISETLRTQYSDAEKRLQDSSKTQVDPMRLNKNPKSLDNDIRARLEN
KPMLAPPTIQVSDSDNATTAKTNDARLTMILGNLTGIADQDITTRLHNNLDSTLLRHEMA
HNKFRELSDAYSSSLDDAQKADDIMHQANNNYNAVDKKVQSLEKKVNTLNQELSQLQPGD
PQYNKVLTQKNAAEKTLTLSLQKKSLAEKSLNTAIMDADAAIGQSMEIFDEIQQQEQINN
FTTNICLTQENQKNRNATATFILLITSVMEVIGDTNCDSIKNQSEVMKEINHVRENKLNE
TARKYTTTTKVLKIVNECVTVVTFAVSAVLIVVGLLAAVPSGGSSIAGALALIGGIAGAV
VLGVDITCQIALGTTATGWILGKVVEGLSAAIKTVDPTLLAITALLDVIGVDQDTIELVK
SIYASAAASIVMATVMIGAAVICSVAIGAVVSALSKTAAEEVTKEITSTIKSTIESIINS
VSKNIIKVLDSVCSVLQTSAVVLKLIAKISNGLEKIGLLICAIATSTMNCFVAGNSADMA
ILQQDMSNLSKTREQMLSVLQRVDKTVEQEVSQMVRVLQHRTEALKFASHSIV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaccgattacgggacaaacgatcacgtttgaacaaatcagtgaaacattgcgt
acacagtatagcgatgcggaaaaaagactgcaggacagcagcaaaacgcaagttgatccc
atgcggcttaataaaaacccgaaatcccttgataacgatattcgcgctcgtcttgaaaac
aaaccgatgcttgctccgcctacaatacaggtttcagattcagacaacgccactacagca
aagacgaatgatgcccgcctgacaatgattttgggtaatttaacaggcattgccgatcag
gatattacaacacgtttgcataataaccttgacagcaccctgcttcgacacgaaatggca
cataataagtttcgtgaattaagtgacgcttactcctcgtcattagatgatgcgcaaaaa
gccgacgatatcatgcatcaggccaataataattacaatgcggtcgataaaaaggtgcaa
tcgctggagaaaaaagtcaacacattgaatcaagagctgtcgcaactgcaacctggcgat
ccgcaatataataaagtactgacgcaaaaaaatgcggctgaaaaaacactcacgctgtca
ttacaaaaaaaatcgttagctgagaaatcgttaaatacagccattatggatgctgatgct
gcgatcggccaaagtatggaaatttttgacgaaattcaacagcaagaacagattaataac
ttcaccaccaatatttgcctgacacaggaaaaccagaaaaatagaaacgcgacagccaca
tttatccttttgattacttcagtaatggaagttattggtgataccaattgcgactctatt
aaaaatcaatctgaggtaatgaaagagattaaccatgtcagggaaaataaactcaatgaa
acagcacgtaaatatactaccacgactaaagttttaaaaatcgttaatgagtgtgtaact
gtagttacctttgccgtaagcgcagtcttaattgttgttggtcttcttgctgcagttcca
agtggtggttcaagtattgcgggtgcattggcacttattggaggaatagcgggcgcagta
gtattaggtgtagatatcacttgtcaaatcgctctgggcaccacggctaccggctggatt
ttagggaaagttgtagaaggtctttcggctgcgattaaaacagttgatcccactctgctc
gcaatcaccgcgcttctggacgttattggtgtcgatcaagatacgattgaactggttaaa
agtatttacgcaagtgcagccgcttctattgtcatggcgacagtaatgattggtgcagct
gtaatatgttctgtagcaataggggccgttgtttctgcattatcaaaaacagccgccgaa
gaagtcaccaaagaaataacaagcactataaaatcaaccattgaatccattattaattcc
gtttcaaaaaatattataaaggtattagacagcgtatgcagcgtgctacaaacatcagcc
gtagtgttgaagttgattgccaaaataagtaatggcctggagaaaataggcttactcatc
tgtgcaatagcaacatcgacgatgaattgttttgttgctggaaactctgccgacatggca
attttacaacaggacatgagtaatctatcaaaaacgcgtgaacaaatgctttcagtattg
caaagggtggataaaaccgtcgaacaagaggtaagccagatggtaagagtattacaacac
cgaactgaagccttaaaatttgcttcccattctatcgtataa
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